Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU447 |
| length | 234 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G370 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 423535 ~ 423768 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU446 | lncRNA | upstream | 23 | 423216 ~ 423512 (+) | True | G369 |
| TU434 | lncRNA | upstream | 28303 | 393425 ~ 395232 (+) | True | G357 |
| TU427 | lncRNA | upstream | 32193 | 389573 ~ 391342 (+) | False | G355 |
| TU432 | lncRNA | upstream | 32797 | 390339 ~ 390738 (+) | True | G355 |
| TU413 | lncRNA | upstream | 48042 | 375179 ~ 375493 (+) | False | G345 |
| TU450 | lncRNA | downstream | 7893 | 431661 ~ 432635 (+) | True | G373 |
| TU453 | lncRNA | downstream | 11745 | 435513 ~ 435795 (+) | True | G376 |
| TU475 | lncRNA | downstream | 39734 | 463502 ~ 464018 (+) | True | G396 |
| TU470 | lncRNA | downstream | 41119 | 464887 ~ 466528 (+) | True | G391 |
| TU480 | lncRNA | downstream | 50455 | 474223 ~ 474581 (+) | True | G399 |
| XM_036977095.1 | mRNA | upstream | 2302 | 384207 ~ 421233 (+) | True | LOC110532027 |
| XM_036977160.1 | mRNA | downstream | 16197 | 439965 ~ 497128 (+) | False | tbc1d23 |
| XM_036977245.1 | mRNA | downstream | 16198 | 439966 ~ 497128 (+) | False | tbc1d23 |
| XM_036977209.1 | mRNA | downstream | 16199 | 439967 ~ 497128 (+) | False | tbc1d23 |
| XM_036977292.1 | mRNA | downstream | 16200 | 439968 ~ 497128 (+) | True | tbc1d23 |
| XM_021602630.2 | mRNA | downstream | 178335 | 602103 ~ 617595 (+) | True | nit2 |
| TU206 | other | upstream | 103561 | 318047 ~ 319974 (+) | False | G166 |
| TU83 | other | upstream | 293272 | 120466 ~ 130263 (+) | True | G51 |
| TU80 | other | upstream | 303228 | 112959 ~ 120307 (+) | True | G50 |
| TU55 | other | upstream | 329817 | 56555 ~ 93718 (+) | True | G26 |
| TU47 | other | upstream | 351236 | 52711 ~ 72299 (+) | True | G19 |
| TU707 | other | downstream | 580015 | 1003783 ~ 1009153 (+) | False | G583 |
| TU710 | other | downstream | 580015 | 1003783 ~ 1010207 (+) | False | G583 |
| TU1201 | other | downstream | 1655130 | 2078898 ~ 2079603 (+) | False | G961 |
| TU1202 | other | downstream | 1655130 | 2078898 ~ 2079603 (+) | False | G961 |
| TU1203 | other | downstream | 1655130 | 2078898 ~ 2079603 (+) | True | G961 |
