Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU5597 |
| length | 209 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G4330 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 5579364 ~ 5579784 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU5593 | lncRNA | upstream | 8140 | 5570716 ~ 5571224 (+) | True | G4326 |
| TU5506 | lncRNA | upstream | 102371 | 5476543 ~ 5476993 (+) | True | G4258 |
| TU5481 | lncRNA | upstream | 117736 | 5461429 ~ 5461628 (+) | True | G4238 |
| TU5477 | lncRNA | upstream | 119923 | 5459034 ~ 5459441 (+) | True | G4234 |
| TU5468 | lncRNA | upstream | 128888 | 5450276 ~ 5450476 (+) | True | G4225 |
| TU5652 | lncRNA | downstream | 50154 | 5629938 ~ 5630253 (+) | True | G4373 |
| TU5659 | lncRNA | downstream | 55550 | 5635334 ~ 5636741 (+) | True | G4378 |
| TU5695 | lncRNA | downstream | 77656 | 5657440 ~ 5658080 (+) | True | G4395 |
| TU5759 | lncRNA | downstream | 133438 | 5713222 ~ 5714024 (+) | True | G4436 |
| TU5777 | lncRNA | downstream | 175956 | 5755740 ~ 5756202 (+) | True | G4454 |
| XM_036983882.1 | mRNA | upstream | 622278 | 4948727 ~ 4957086 (+) | False | agxta |
| XM_036983911.1 | mRNA | upstream | 622278 | 4949391 ~ 4957086 (+) | True | agxta |
| XM_021616297.2 | mRNA | upstream | 1726355 | 3848517 ~ 3853009 (+) | True | im:7152348 |
| trnap-ugg | mRNA | upstream | 1731405 | 3847888 ~ 3847959 (+) | True | trnap-ugg |
| trnap-cgg | mRNA | upstream | 1731670 | 3847623 ~ 3847694 (+) | True | trnap-cgg |
| XM_036984367.1 | mRNA | downstream | 84387 | 5664171 ~ 5767693 (+) | False | LOC110526525 |
| XM_036984422.1 | mRNA | downstream | 84387 | 5664171 ~ 5767693 (+) | False | LOC110526525 |
| XM_036984452.1 | mRNA | downstream | 84387 | 5664171 ~ 5767693 (+) | False | LOC110526525 |
| XM_036984485.1 | mRNA | downstream | 84388 | 5664172 ~ 5767693 (+) | False | LOC110526525 |
| XM_036984495.1 | mRNA | downstream | 84388 | 5664172 ~ 5767693 (+) | False | LOC110526525 |
| TU4684 | other | upstream | 722299 | 4856525 ~ 4857065 (+) | True | G3597 |
| TU4683 | other | upstream | 723116 | 4854521 ~ 4856248 (+) | True | G3596 |
| TU4331 | other | upstream | 1137456 | 4439966 ~ 4441908 (+) | True | G3351 |
| TU4195 | other | upstream | 1179920 | 4398904 ~ 4399444 (+) | True | G3234 |
| TU4120 | other | upstream | 1401291 | 4175323 ~ 4178073 (+) | True | G3176 |
| TU6645 | other | downstream | 937698 | 6517482 ~ 6518189 (+) | True | G5276 |
| TU6993 | other | downstream | 1231210 | 6810994 ~ 6811621 (+) | True | G5581 |
| TU7952 | other | downstream | 2145262 | 7725046 ~ 7725609 (+) | True | G6434 |
| TU8049 | other | downstream | 2305607 | 7885391 ~ 7885907 (+) | True | G6518 |
| TU8398 | other | downstream | 2456833 | 8036617 ~ 8037154 (+) | True | G6807 |
