RNA id: trnay-gua



Basic Information


Item Value
RNA id trnay-gua
length 73
RNA type mRNA
GC content 0.52
exon number 2
gene id trnay-gua
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 95009602 ~ 95009691 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ccttcgatagctcagttggtagagcggaggactgtagatccttaggtcgctggttcaaatccggctcgaagga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU234827 lncRNA downstream 1416 95007980 ~ 95008186 (-) True G207454
TU234786 lncRNA downstream 88577 94920075 ~ 94921025 (-) False G207421
TU234788 lncRNA downstream 88577 94920075 ~ 94921025 (-) False G207421
TU234789 lncRNA downstream 88577 94920075 ~ 94921025 (-) True G207421
TU234626 lncRNA downstream 143247 94863530 ~ 94866355 (-) True G207287
TU234622 lncRNA upstream 4245 95013936 ~ 95015257 (-) True G207283
TU234835 lncRNA upstream 10800 95020491 ~ 95020717 (-) True G207462
TU234844 lncRNA upstream 40193 95049884 ~ 95050507 (-) True G207471
TU234860 lncRNA upstream 71351 95081042 ~ 95081243 (-) True G207487
TU234863 lncRNA upstream 76197 95085888 ~ 95086181 (-) True G207490
XM_036959842.1 mRNA downstream 34689 94959943 ~ 94974913 (-) True LOC110500345
XM_036959851.1 mRNA downstream 41462 94959918 ~ 94968140 (-) False LOC110500345
XR_005039105.1 mRNA downstream 228234 94777558 ~ 94781368 (-) True LOC110500320
XR_005039107.1 mRNA downstream 228236 94777558 ~ 94781366 (-) False LOC110500320
XR_005039104.1 mRNA downstream 228240 94777558 ~ 94781362 (-) False LOC110500320
XM_021577703.2 mRNA upstream 5984 95015675 ~ 95020429 (-) True LOC110500368
XM_036959906.1 mRNA upstream 87688 95097379 ~ 95124547 (-) True LOC110502417
LOC118944198 mRNA upstream 261402 95271093 ~ 95271272 (-) True LOC118944198
XM_021580524.2 mRNA upstream 618758 95628449 ~ 95631972 (-) False parietopsin
XM_036960040.1 mRNA upstream 626205 95635896 ~ 95664503 (-) True LOC110502485
TU234691 other downstream 233246 94762662 ~ 94776356 (-) True G207340
TU234581 other downstream 379863 94629437 ~ 94629739 (-) True G207249
TU234576 other downstream 392370 94616915 ~ 94617232 (-) True G207244
TU234014 other downstream 681419 94327910 ~ 94328183 (-) True G206750
TU234008 other downstream 695684 94313390 ~ 94313918 (-) True G206744
TU235317 other upstream 368032 95377723 ~ 95408714 (-) True G207858
TU235447 other upstream 514277 95523968 ~ 95524227 (-) True G207959
TU235358 other upstream 594537 95604228 ~ 95609786 (-) True G207884
TU235350 other upstream 672346 95682037 ~ 95686864 (-) False G207876
TU235346 other upstream 672932 95682623 ~ 95686864 (-) True G207876