Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU123114 |
| length | 303 |
| lncRNA type | intronic |
| GC content | 0.32 |
| exon number | 2 |
| gene id | G108330 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 5221868 ~ 5222697 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU123110 | lncRNA | upstream | 11508 | 5209780 ~ 5210360 (+) | True | G108326 |
| TU123107 | lncRNA | upstream | 14802 | 5206565 ~ 5207066 (+) | True | G108323 |
| TU123015 | lncRNA | upstream | 28911 | 5191577 ~ 5192957 (+) | True | G108252 |
| TU123074 | lncRNA | upstream | 50213 | 5167395 ~ 5171655 (+) | False | G108300 |
| TU123073 | lncRNA | upstream | 50213 | 5170196 ~ 5171655 (+) | True | G108300 |
| TU123115 | lncRNA | downstream | 910 | 5223607 ~ 5224256 (+) | False | G108331 |
| TU123116 | lncRNA | downstream | 910 | 5223607 ~ 5224085 (+) | False | G108331 |
| TU123117 | lncRNA | downstream | 910 | 5223607 ~ 5224256 (+) | True | G108331 |
| TU123118 | lncRNA | downstream | 2509 | 5225206 ~ 5226130 (+) | True | G108332 |
| TU123127 | lncRNA | downstream | 15530 | 5238227 ~ 5240350 (+) | True | G108334 |
| XR_005034658.1 | mRNA | upstream | 44881 | 5148101 ~ 5176987 (+) | False | LOC110506140 |
| XM_036935645.1 | mRNA | upstream | 44881 | 5148106 ~ 5176987 (+) | True | LOC110506140 |
| XR_005034656.1 | mRNA | upstream | 484584 | 4735657 ~ 4737284 (+) | False | LOC118937361 |
| XR_005034650.1 | mRNA | upstream | 484585 | 4735657 ~ 4737283 (+) | False | LOC118937361 |
| XR_005034654.1 | mRNA | upstream | 484586 | 4735657 ~ 4737282 (+) | False | LOC118937361 |
| XM_036935668.1 | mRNA | downstream | 5360 | 5228057 ~ 5235894 (+) | True | LOC110520809 |
| XM_021587149.2 | mRNA | downstream | 51459 | 5274156 ~ 5275584 (+) | True | mrpl32 |
| XR_005034673.1 | mRNA | downstream | 60997 | 5283694 ~ 5285741 (+) | False | LOC118937366 |
| XM_021595380.2 | mRNA | downstream | 83579 | 5306276 ~ 5310035 (+) | True | ccdc127a |
| XM_036935725.1 | mRNA | downstream | 98857 | 5321554 ~ 5349672 (+) | False | phf20l1 |
| TU123045 | other | upstream | 84876 | 5136356 ~ 5136992 (+) | True | G108280 |
| TU122792 | other | upstream | 363594 | 4857911 ~ 4858274 (+) | True | G108048 |
| TU122673 | other | upstream | 410293 | 4808739 ~ 4811575 (+) | True | G107955 |
| TU122634 | other | upstream | 476282 | 4744168 ~ 4745586 (+) | True | G107922 |
| TU120940 | other | upstream | 1083372 | 4137813 ~ 4138496 (+) | True | G106814 |
| TU123151 | other | downstream | 73482 | 5296179 ~ 5299933 (+) | True | G108354 |
| TU123438 | other | downstream | 283849 | 5506546 ~ 5542865 (+) | True | ptp4a3b |
| TU123443 | other | downstream | 358596 | 5581293 ~ 5582450 (+) | True | LOC110506279 |
| TU123575 | other | downstream | 497268 | 5719965 ~ 5725579 (+) | False | G108682 |
| TU123579 | other | downstream | 497268 | 5719965 ~ 5725382 (+) | True | G108682 |
