Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU324316 |
| length | 899 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 2 |
| gene id | LOC110520379 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 64485789 ~ 64641565 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0018108 | peptidyl-tyrosine phosphorylation | biological_process |
| GO:0048013 | ephrin receptor signaling pathway | biological_process |
| GO:0005887 | integral component of plasma membrane | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0005003 | ephrin receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU324336 | lncRNA | downstream | 46829 | 64438685 ~ 64439026 (-) | True | G286071 |
| TU324331 | lncRNA | downstream | 51835 | 64433725 ~ 64434020 (-) | True | G286066 |
| TU324112 | lncRNA | downstream | 102417 | 64383134 ~ 64383438 (-) | True | G285863 |
| TU324096 | lncRNA | downstream | 113077 | 64372572 ~ 64372778 (-) | True | G285848 |
| TU324094 | lncRNA | downstream | 114415 | 64370708 ~ 64371440 (-) | True | G285846 |
| TU324391 | lncRNA | upstream | 66973 | 64553788 ~ 64554048 (-) | True | G286125 |
| TU324397 | lncRNA | upstream | 78998 | 64565813 ~ 64566035 (-) | True | G286131 |
| TU324398 | lncRNA | upstream | 79425 | 64566240 ~ 64566445 (-) | True | G286132 |
| TU324402 | lncRNA | upstream | 85275 | 64572090 ~ 64572345 (-) | True | G286136 |
| TU324404 | lncRNA | upstream | 96671 | 64583486 ~ 64586498 (-) | True | G286138 |
| XM_036974914.1 | mRNA | downstream | 311579 | 63911999 ~ 64174276 (-) | True | LOC110520380 |
| XM_036964596.1 | mRNA | downstream | 581637 | 63901468 ~ 63904218 (-) | False | LOC110505395 |
| XM_036964597.1 | mRNA | downstream | 581637 | 63901468 ~ 63904218 (-) | True | LOC110505395 |
| XM_036964580.1 | mRNA | downstream | 581641 | 63901468 ~ 63904214 (-) | False | LOC110505395 |
| XM_036964595.1 | mRNA | downstream | 581642 | 63901468 ~ 63904213 (-) | False | LOC110505395 |
| XM_021597673.2 | mRNA | upstream | 365688 | 64852503 ~ 64855851 (-) | True | LOC110520388 |
| XM_021597667.2 | mRNA | upstream | 375211 | 64862026 ~ 64883035 (-) | False | LOC110520386 |
| XM_021597666.2 | mRNA | upstream | 375211 | 64862026 ~ 64890987 (-) | False | LOC110520386 |
| XM_036974918.1 | mRNA | upstream | 375719 | 64862534 ~ 64890987 (-) | True | LOC110520386 |
| XM_036965063.1 | mRNA | upstream | 397523 | 64884338 ~ 64895983 (-) | True | LOC118944694 |
| TU322065 | other | downstream | 1770678 | 62714575 ~ 62715177 (-) | True | G284018 |
| TU315276 | other | downstream | 6896672 | 57584386 ~ 57589183 (-) | True | G277749 |
| TU315188 | other | downstream | 7082280 | 57402984 ~ 57403575 (-) | True | G277673 |
| TU315090 | other | downstream | 7188093 | 57270782 ~ 57297762 (-) | True | si:dkey-91i10.3 |
| TU312500 | other | downstream | 9074368 | 55410143 ~ 55411487 (-) | True | G275250 |
| TU324819 | other | upstream | 482734 | 64969549 ~ 64970755 (-) | True | G286522 |
| TU324898 | other | upstream | 527444 | 65014259 ~ 65029736 (-) | True | G286580 |
| TU324968 | other | upstream | 567885 | 65054700 ~ 65055211 (-) | False | G286638 |
| TU324969 | other | upstream | 567885 | 65054700 ~ 65075985 (-) | True | G286638 |
| TU325334 | other | upstream | 748365 | 65235180 ~ 65235908 (-) | True | G286953 |
