Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00002328 |
| length | 854 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 7 |
| gene id | XLOC_001419 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 43695033 ~ 43727613 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | description |
|---|---|
| ZDB-GENE-050417-343 | Predicted to enable 3-hydroxybutyrate dehydrogenase activity and oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor. Involved in heme metabolic process. Acts upstream of or within erythrocyte maturation and hemoglobin biosynthetic process. Predicted to be active in cytoplasm. Orthologous to human BDH2 (3-hydroxybutyrate dehydrogenase 2). |
| ensembl_id | ENSDART00000133715 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00002321 | lncRNA | downstream | 35503 | 43672669 ~ 43684583 (-) | True | XLOC_001418 |
| TCONS_00003463 | lncRNA | downstream | 102917 | 43518209 ~ 43617169 (-) | False | XLOC_001417 |
| TCONS_00002972 | lncRNA | downstream | 104948 | 43518355 ~ 43615138 (-) | True | XLOC_001417 |
| TCONS_00003462 | lncRNA | downstream | 179999 | 43518209 ~ 43540087 (-) | False | XLOC_001417 |
| TCONS_00002971 | lncRNA | downstream | 564633 | 43130890 ~ 43155453 (-) | True | XLOC_001416 |
| TCONS_00002337 | lncRNA | upstream | 174995 | 43902413 ~ 43904199 (-) | False | XLOC_001422 |
| TCONS_00002336 | lncRNA | upstream | 174995 | 43902413 ~ 43904279 (-) | True | XLOC_001422 |
| TCONS_00002344 | lncRNA | upstream | 224880 | 43952298 ~ 43953627 (-) | True | XLOC_001427 |
| TCONS_00002360 | lncRNA | upstream | 807207 | 44534625 ~ 44536218 (-) | True | XLOC_001440 |
| TCONS_00002366 | lncRNA | upstream | 979983 | 44707401 ~ 44710865 (-) | True | XLOC_001444 |
| TCONS_00002322 | mRNA | downstream | 7966 | 43695033 ~ 43712120 (-) | False | XLOC_001419 |
| TCONS_00002320 | mRNA | downstream | 35502 | 43652480 ~ 43684584 (-) | False | XLOC_001418 |
| TCONS_00002317 | mRNA | downstream | 941011 | 42776553 ~ 42779075 (-) | False | XLOC_001414 |
| TCONS_00002318 | mRNA | downstream | 941576 | 42776942 ~ 42778510 (-) | True | XLOC_001414 |
| TCONS_00002315 | mRNA | downstream | 1430382 | 42281308 ~ 42289704 (-) | False | XLOC_001413 |
| TCONS_00002330 | mRNA | upstream | 74539 | 43801957 ~ 43862638 (-) | False | XLOC_001420 |
| TCONS_00002331 | mRNA | upstream | 79230 | 43806648 ~ 43892349 (-) | True | XLOC_001420 |
| TCONS_00002332 | mRNA | upstream | 166820 | 43894238 ~ 43899422 (-) | False | XLOC_001421 |
| TCONS_00002333 | mRNA | upstream | 167107 | 43894525 ~ 43897831 (-) | True | XLOC_001421 |
| TCONS_00002334 | mRNA | upstream | 174548 | 43901966 ~ 43905263 (-) | False | XLOC_001422 |
| TCONS_00002319 | other | downstream | 745211 | 42974760 ~ 42974875 (-) | True | XLOC_001415 |
| TCONS_00002314 | other | downstream | 1442436 | 42277523 ~ 42277650 (-) | True | XLOC_001412 |
| TCONS_00002309 | other | downstream | 2118934 | 41601035 ~ 41601152 (-) | True | XLOC_001407 |
| TCONS_00002308 | other | downstream | 2408194 | 41311777 ~ 41311892 (-) | True | XLOC_001402 |
| TCONS_00002306 | other | downstream | 2459808 | 41230815 ~ 41260278 (-) | True | XLOC_001400 |
| TCONS_00002392 | other | upstream | 1588791 | 45316209 ~ 45317628 (-) | True | XLOC_001459 |
| TCONS_00002410 | other | upstream | 1927657 | 45655075 ~ 45662751 (-) | True | XLOC_001465 |
| TCONS_00002426 | other | upstream | 2900071 | 46627489 ~ 46630704 (-) | True | XLOC_001475 |
| TCONS_00002434 | other | upstream | 2994961 | 46722379 ~ 46722518 (-) | False | XLOC_001480 |
| TCONS_00002435 | other | upstream | 2995204 | 46722622 ~ 46722705 (-) | False | XLOC_001480 |
