Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU387000 |
| length | 275 |
| lncRNA type | read_through |
| GC content | 0.44 |
| exon number | 3 |
| gene id | G341985 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 30956085 ~ 31107772 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU386928 | lncRNA | upstream | 129131 | 30826550 ~ 30826954 (+) | True | G341922 |
| TU386927 | lncRNA | upstream | 129801 | 30825553 ~ 30826284 (+) | True | G341921 |
| TU386914 | lncRNA | upstream | 141486 | 30813598 ~ 30814599 (+) | True | G341909 |
| TU386920 | lncRNA | upstream | 150470 | 30805393 ~ 30805615 (+) | True | G341914 |
| TU386918 | lncRNA | upstream | 153391 | 30800295 ~ 30802694 (+) | True | G341912 |
| TU387098 | lncRNA | downstream | 26620 | 31134392 ~ 31134598 (+) | True | G342072 |
| TU387102 | lncRNA | downstream | 31017 | 31138789 ~ 31138992 (+) | True | G342076 |
| TU387103 | lncRNA | downstream | 31545 | 31139317 ~ 31139564 (+) | True | G342077 |
| TU387108 | lncRNA | downstream | 37770 | 31145542 ~ 31145903 (+) | True | G342082 |
| TU387109 | lncRNA | downstream | 39005 | 31146777 ~ 31147018 (+) | True | G342083 |
| XM_021600906.2 | mRNA | upstream | 133026 | 30816416 ~ 30823059 (+) | False | LOC110522477 |
| XM_021600904.2 | mRNA | upstream | 133026 | 30817802 ~ 30823059 (+) | False | LOC110522477 |
| XM_021600907.2 | mRNA | upstream | 133026 | 30817802 ~ 30823059 (+) | True | LOC110522477 |
| XR_002473325.2 | mRNA | upstream | 158398 | 30796219 ~ 30797687 (+) | True | LOC110522479 |
| XR_002473324.2 | mRNA | upstream | 158401 | 30796219 ~ 30797684 (+) | False | LOC110522479 |
| XM_036976090.1 | mRNA | downstream | 61879 | 31169651 ~ 31182712 (+) | False | LOC110522488 |
| XM_021600917.2 | mRNA | downstream | 61918 | 31169690 ~ 31175097 (+) | False | LOC110522488 |
| XM_021600916.2 | mRNA | downstream | 67796 | 31175568 ~ 31182712 (+) | True | LOC110522488 |
| XM_021600920.2 | mRNA | downstream | 79454 | 31187226 ~ 31227364 (+) | False | ppp2r5cb |
| XM_021600919.2 | mRNA | downstream | 79458 | 31187230 ~ 31227364 (+) | False | ppp2r5cb |
| TU384729 | other | upstream | 1619146 | 29335369 ~ 29336939 (+) | True | G339928 |
| TU384628 | other | upstream | 1789089 | 29166518 ~ 29166996 (+) | True | G339830 |
| TU384441 | other | upstream | 2040546 | 28914599 ~ 28915539 (+) | True | G339693 |
| TU384407 | other | upstream | 2096930 | 28858716 ~ 28859155 (+) | True | G339660 |
| TU381324 | other | upstream | 3354529 | 27590852 ~ 27601556 (+) | True | LOC118964415 |
| TU387608 | other | downstream | 274054 | 31381826 ~ 31382749 (+) | True | G342538 |
| TU387623 | other | downstream | 310183 | 31417955 ~ 31419256 (+) | False | LOC110522493 |
| TU387645 | other | downstream | 343361 | 31451133 ~ 31451476 (+) | True | G342571 |
| TU387844 | other | downstream | 678093 | 31785865 ~ 31786206 (+) | True | G342707 |
| TU389208 | other | downstream | 1587214 | 32694986 ~ 32704371 (+) | True | G343958 |
