Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU470842 |
| length | 225 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G415439 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 53938168 ~ 53939299 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU470794 | lncRNA | downstream | 83359 | 53854280 ~ 53854809 (-) | True | G415393 |
| TU470752 | lncRNA | downstream | 111584 | 53826216 ~ 53826584 (-) | True | G415363 |
| TU470741 | lncRNA | downstream | 126942 | 53811000 ~ 53811226 (-) | True | G415353 |
| TU470735 | lncRNA | downstream | 131911 | 53806036 ~ 53806257 (-) | True | G415347 |
| TU470682 | lncRNA | downstream | 219965 | 53717766 ~ 53718203 (-) | True | G415297 |
| TU470765 | lncRNA | upstream | 22643 | 53961942 ~ 53989222 (-) | False | LOC110524038 |
| TU470767 | lncRNA | upstream | 22658 | 53961957 ~ 53989222 (-) | True | LOC110524038 |
| TU470863 | lncRNA | upstream | 54720 | 53994019 ~ 53994561 (-) | True | G415460 |
| TU470871 | lncRNA | upstream | 63149 | 54002448 ~ 54005673 (-) | False | G415464 |
| TU470876 | lncRNA | upstream | 68840 | 54008139 ~ 54008478 (-) | True | G415468 |
| XM_021603331.2 | mRNA | downstream | 9432 | 53922807 ~ 53928736 (-) | True | ccdc181 |
| XM_021603329.2 | mRNA | downstream | 9433 | 53922807 ~ 53928735 (-) | False | ccdc181 |
| XM_021603324.2 | mRNA | downstream | 187900 | 53746858 ~ 53750268 (-) | True | LOC110524031 |
| XM_036977827.1 | mRNA | downstream | 192605 | 53740644 ~ 53745563 (-) | True | LOC118964619 |
| XM_021601398.2 | mRNA | downstream | 203264 | 53723390 ~ 53734904 (-) | True | LOC110522968 |
| XM_036977834.1 | mRNA | upstream | 1644 | 53940943 ~ 53945411 (-) | False | prrg1 |
| XM_036977833.1 | mRNA | upstream | 1644 | 53940943 ~ 53945438 (-) | False | prrg1 |
| XM_036977836.1 | mRNA | upstream | 1644 | 53940943 ~ 53945596 (-) | False | prrg1 |
| XM_036977835.1 | mRNA | upstream | 1644 | 53940943 ~ 53945602 (-) | True | prrg1 |
| XM_036977837.1 | mRNA | upstream | 22643 | 53961942 ~ 53973206 (-) | False | LOC110524038 |
| TU470822 | other | downstream | 45262 | 53890760 ~ 53892906 (-) | True | G415420 |
| TU470639 | other | downstream | 319304 | 53617738 ~ 53618864 (-) | True | G415256 |
| TU470637 | other | downstream | 319409 | 53617683 ~ 53618759 (-) | False | G415256 |
| TU467825 | other | downstream | 2325606 | 51558378 ~ 51612562 (-) | True | G412613 |
| TU467562 | other | downstream | 2561038 | 51373465 ~ 51377130 (-) | True | G412372 |
| TU470869 | other | upstream | 64432 | 54003731 ~ 54005673 (-) | True | G415464 |
| TU471641 | other | upstream | 423987 | 54363286 ~ 54386228 (-) | False | G416110 |
| TU472396 | other | upstream | 1202016 | 55141315 ~ 55160267 (-) | True | LOC110524071 |
| TU473281 | other | upstream | 1669536 | 55608835 ~ 55609730 (-) | True | G417527 |
| TU474559 | other | upstream | 2769499 | 56708798 ~ 56709840 (-) | False | LOC110522975 |
