RNA id: trnav-uac-6



Basic Information


Item Value
RNA id trnav-uac-6
length 73
RNA type mRNA
GC content 0.51
exon number 1
gene id trnav-uac-6
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 52532743 ~ 52532815 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtttccgtagtgtagtggttatcacgttcgccttacacgcgaaaggtccccagttcgagaccgggcggaaaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU819437 lncRNA downstream 42340 52483522 ~ 52490403 (-) True G721235
TU819408 lncRNA downstream 73084 52448814 ~ 52459659 (-) True G721207
TU819406 lncRNA downstream 75885 52448383 ~ 52456858 (-) False G721207
TU819407 lncRNA downstream 75885 52448383 ~ 52456858 (-) False G721207
TU819401 lncRNA downstream 123515 52408868 ~ 52409228 (-) True G721203
TU819453 lncRNA upstream 394 52533209 ~ 52668446 (-) True G721245
TU819457 lncRNA upstream 7265 52540080 ~ 52545734 (-) True G721248
TU819443 lncRNA upstream 56404 52589219 ~ 52656589 (-) True G721238
TU819473 lncRNA upstream 186471 52719286 ~ 52726784 (-) False G721260
TU819474 lncRNA upstream 187972 52720787 ~ 52726784 (-) False G721260
trnav-uac-5 mRNA downstream 130 52532541 ~ 52532613 (-) True trnav-uac-5
trnav-cac-25 mRNA downstream 315 52532356 ~ 52532428 (-) True trnav-cac-25
trnav-aac-47 mRNA downstream 1285 52531386 ~ 52531458 (-) True trnav-aac-47
trnav-aac-46 mRNA downstream 1487 52531184 ~ 52531256 (-) True trnav-aac-46
trnav-cac-24 mRNA downstream 1672 52530999 ~ 52531071 (-) True trnav-cac-24
trnav-aac-48 mRNA upstream 1360 52534175 ~ 52534247 (-) True trnav-aac-48
trnav-aac-49 mRNA upstream 3204 52536019 ~ 52536091 (-) True trnav-aac-49
trnav-aac-50 mRNA upstream 5359 52538174 ~ 52538246 (-) True trnav-aac-50
trnav-aac-51 mRNA upstream 5558 52538373 ~ 52538445 (-) True trnav-aac-51
trnav-aac-52 mRNA upstream 7063 52539878 ~ 52539950 (-) True trnav-aac-52
TU817704 other downstream 1273724 51252355 ~ 51259019 (-) True LOC110530043
TU817090 other downstream 1593272 50936928 ~ 50939471 (-) True G719151
TU816422 other downstream 2643491 49866630 ~ 49889252 (-) False LOC110530011
TU816366 other downstream 2695047 49785674 ~ 49837696 (-) True G718489
TU814229 other downstream 3743781 48788521 ~ 48788962 (-) True G716488
TU819491 other upstream 228224 52761039 ~ 52761451 (-) True G721275
TU820029 other upstream 930367 53463182 ~ 53463764 (-) False LOC110529122
TU820769 other upstream 965333 53498148 ~ 53499730 (-) True G722459
TU820950 other upstream 1270628 53803443 ~ 53856065 (-) True G722602
TU821019 other upstream 1393413 53926228 ~ 53927959 (-) True G722670