RNA id: TU764278



Basic Information


Item Value
RNA id TU764278
length 200
lncRNA type antisense_over
GC content 0.36
exon number 1
gene id G670903
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 9260856 ~ 9261055 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TAGTCAATCATCACTAATACGCTGCCATCCAGGCTAATGGCGATACAGACGAGACACAAAATAATTACATAAAGCAAACTTTATAATTATAACTTAGCTATATGTGAATCGTAATCTAGCGAGACCAGCTAGTTGAACATGCAAACTACCTAAAACTAATGTTAAGCAAAGGCAACTACCTAAAACTAATGTCAGCTCCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU764271 lncRNA downstream 10745 9249814 ~ 9250111 (-) True G670896
TU764270 lncRNA downstream 11044 9249599 ~ 9249812 (-) True G670895
TU764152 lncRNA downstream 101269 9158775 ~ 9159587 (-) True G670791
TU764051 lncRNA downstream 189673 9068995 ~ 9071183 (-) True G670702
TU764052 lncRNA downstream 203351 9056947 ~ 9057505 (-) True G670703
TU764285 lncRNA upstream 12415 9273470 ~ 9273673 (-) True G670909
TU764293 lncRNA upstream 16661 9277716 ~ 9277971 (-) True G670917
TU764492 lncRNA upstream 37581 9298636 ~ 9352842 (-) False G671095
TU764494 lncRNA upstream 37581 9298636 ~ 9313407 (-) True G671095
TU764575 lncRNA upstream 182850 9443905 ~ 9501606 (-) True G671172
XM_036984685.1 mRNA downstream 135621 9012231 ~ 9125235 (-) False cdc42bpb
XM_036984686.1 mRNA downstream 135621 9012231 ~ 9125235 (-) False cdc42bpb
XM_036984687.1 mRNA downstream 135621 9012231 ~ 9125235 (-) False cdc42bpb
XM_036984689.1 mRNA downstream 135621 9012231 ~ 9125235 (-) True cdc42bpb
XM_036984684.1 mRNA downstream 261162 8989445 ~ 8999694 (-) True LOC110529323
NM_001160490.1 mRNA upstream 264814 9525869 ~ 9532652 (-) True LOC100301659
XM_021611467.2 mRNA upstream 383470 9644525 ~ 9650080 (-) True LOC110529336
XM_036986822.1 mRNA upstream 512950 9774005 ~ 9791069 (-) True LOC118965597
XM_036984713.1 mRNA upstream 564927 9825982 ~ 9884118 (-) False kif26aa
XM_036984711.1 mRNA upstream 564927 9825982 ~ 9993452 (-) False kif26aa
TU764088 other downstream 299125 8956093 ~ 8961731 (-) True G670733
TU763857 other downstream 683076 8577051 ~ 8577780 (-) True G670549
TU763341 other downstream 918736 8340990 ~ 8342120 (-) True G670097
TU763125 other downstream 1149898 8107871 ~ 8110958 (-) True G669918
TU762377 other downstream 1842621 7416025 ~ 7418235 (-) True G669281
TU764280 other upstream 2795 9263850 ~ 9265093 (-) True G670905
TU764524 other upstream 85329 9346384 ~ 9347879 (-) True G671122
TU765218 other upstream 710627 9971682 ~ 9972812 (-) False kif26aa
TU765219 other upstream 710627 9971682 ~ 9972812 (-) False kif26aa
TU765319 other upstream 854035 10115090 ~ 10121973 (-) False G671820

Expression Profile