G669281


Basic Information

Item Value
gene id G669281
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 7416025 ~ 7418235 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU762377
agggagggagcacatCACCAGACCAAGCACCTGCAGGGCTACAGACAGACTATCACTCTATCATggtaggatggatggagggagggagcacatCACCACACCAAGCACCCGCAGggctacagacagacactatCACTCTATCAtggtaggatggagggagggagggagggagcacatCACCAGACCAAGCACCTGCAGGGCTACAGACAGACTATCACTCTATCATggtaggatggatggagggagggaagaagcaCATCACCACACCAAGCACCCGCAGggctacagacagacactatCACTCTATCATGGTAAAAATAAGATTAATGACACGCTTGCCTTTTCGTCACAACAACCGATATCTGTGCTGTTAGTCACATCAACAGGGGAGCCCATCTGCTCCCTGTTGGTGTGACTATCTGGGGGGGGTTTTGTTTGGGGAGGCATCAGTATATTTTTGACACCTGGCTGTGATATTGAACAGCACACGACTGTTTGATGAATTAAGAGGGCTGCACTATATTGTTAAATTAACTAAGgccttgttgttgtttttacacgATGAAAACATGTTTGTTTGGTGACTGGACATGAGGTTACACATTTCTTTTTCCACTCTATTTATATTGTGTGGCTGTAAAGTTTGGGTTCACTCGAGGTGTCTGTCACTTGGTCCTGATGTGCTaaatgtgtgtatgcgtgtgtgtgagagagcgagaaagtgtttgtgtgtgtgtctatctttgCCTCTGTGTACGTTAGTTTAGGCGAGAGAGATGTCCATAGAATGGGTACACCAGAAATATTACCCAGGATTCCCCCGCCCTTAGTTCGAAATGGCTTCACTCAGCTACCCTAGTTCAAAATGGCTTCCCTCTTTTCCTGCTACATACAACGGTCAGAAGAACAAACAGTCATTACTGTAAGAATACAGTGCATCGTGTATATTTAAATGTTCAAGGACTAAAATGGCCTCCATTTTCTGCAGAGTTGCTTCAGAATAACCTTGTAGATCTGCCACTTAAACTGGAAAACCTTGCTCAAAACCCAGAGCGTTGACACAACTGCAACTGGTTGCAGGAAACGACAGTTATCTTTTGTTGTAAATGTCCAGTTCAAATTTAAGTGAGCAGTTTTAATTGACCTTTTGATGATAAAAACCCACTCATATATGTTGAGTTGAGGTAATCATCCTAGTTTTAATTGACCTTTTGATGATAAAAACCCACTCATATATGTTGAGTTGAGGTAATCATCCTAGTTTTAATTGACCTTTTGATGATAAAAACCCACTCATATATGTTGAGTTGAGGTAATCATCCTAGTTTTAATTGACCTTTTGATGATAAAAACCCACTCATATATGTTGAGTTGAGGTAATCATCCTAGTTTTAATTGACCTTTTGATGATAAAAACCCACTCATATACGTTGAGTTGAGGTAATCATCCTAGCTCATTAAGGAGACACGGTCTGAGTCTAGGCTGGCTTTTTGAAAAAGTTGTTTcacttacatttttattttttatgttttgtaTATTCTGTTTGTCTTTCCACCTGTCATCGTCTTCATAAACGCAGACAGAGAACGTTGCCTTAGACCTGGTACATTTTATTACTTTGATGTTGTTTCTACTTGTATCGTGAGTTTCCATCTTTACCTGCTATGACATTGAAGCGTCTGTGTTTCCCAATGGCCTTACATTGGAGAGGAGACATATTTTCTAGTCACACAACTGtcttgtgttttattttttgttttgggACTTGGACTAAAGAAAGTccatccttctcttctctctgtccaccccaaGGCTTCTTCAGCAACTGTGATTTTTTCAAAAGCCTAAGCACATGAAACAAAtcacctttctttctttctttaatgTCTATCAGACATGTTAAATATTGCGTGTTAAGGGAGTTTTTTTGTTTTGCGTCCAGACCACCGTTGTACAGTGGTTGTTTCCTCATTTCTCTTTGATTCTGAATTTCAATGCTTTCTTGTGTTCTTTTTCTCCTCTGTACATTGCAGAGGGTTGTGAAGATCGTATTTTAATATTTGTATAAAGTTTAATTTAATTATACCGTGTGTATGTAACTATTTCTAATTAAAGCTTTTTTTTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU762377 True 2129 TUCP 0.40 2 7416025 7418235

Neighbor

gene id symbol gene type direction distance location
LOC110529302 LOC106571090 coding downstream 1724 7400907 ~ 7423688 (-)
LOC110529304 LOC106608157 coding downstream 46503 7340699 ~ 7369522 (-)
LOC110529175 LOC106571087 coding downstream 128635 7256917 ~ 7287390 (-)
sipa1l1 LOC106571085 coding downstream 181500 7000285 ~ 7234525 (-)
LOC110529169 LOC106571069 coding downstream 449774 6855891 ~ 6966251 (-)
susd6 LOC106571091 coding upstream 96 7418331 ~ 7480048 (-)
LOC118965488 NA coding upstream 249512 7667747 ~ 7670221 (-)
LOC110529176 LOC106571097 coding upstream 252560 7670795 ~ 7689709 (-)
LOC118965489 NA coding upstream 373151 7791386 ~ 7802722 (-)
LOC110529310 LOC106571100 coding upstream 524910 7943145 ~ 7944881 (-)
G669311 NA non-coding downstream 20985 7394225 ~ 7395040 (-)
G669307 NA non-coding downstream 27862 7387264 ~ 7388163 (-)
G669285 NA non-coding downstream 60944 7351687 ~ 7355081 (-)
G669251 NA non-coding downstream 65286 7346943 ~ 7350739 (-)
G669229 NA non-coding downstream 81311 7325550 ~ 7334714 (-)
G669339 NA non-coding upstream 62726 7480961 ~ 7481188 (-)
G669340 NA non-coding upstream 65399 7483634 ~ 7484459 (-)
G669345 NA non-coding upstream 75376 7493611 ~ 7493835 (-)
G669346 NA non-coding upstream 77358 7495593 ~ 7495875 (-)
G669349 NA non-coding upstream 81494 7499729 ~ 7500004 (-)
G669278 NA other downstream 95822 7317304 ~ 7320203 (-)
G669087 NA other downstream 424413 6989850 ~ 6991612 (-)
wdr21 dcaf4 other downstream 621838 6786377 ~ 6801903 (-)
G669918 NA other upstream 689636 8107871 ~ 8110958 (-)
G670097 NA other upstream 922755 8340990 ~ 8342120 (-)
G670549 NA other upstream 1158816 8577051 ~ 8577780 (-)
G670733 LOC107575789 other upstream 1537858 8949694 ~ 8961731 (-)
G670905 NA other upstream 1845615 9263850 ~ 9265093 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00000213 NA coding CM030141.1 CM030141.1 7273443 ~ 7289400 (+)
mexican tetra (Astyanax mexicanus) G28637 NA non-coding NC_035899.1 CM008302.1 56214451 ~ 56227860 (+)