LOC118965489


Basic Information

Item Value
gene id LOC118965489
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 7791386 ~ 7802722 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052768.1
atcagggtcacacagtgtgaaacagagagaggaaaaaccTGAAAGgcataacatgtttttttttttcaatacacACACGCAGCCACACTCAAACACAAGATTCACAATACTGGACAGAGGGTCTTTGAGGACTGCTATAGACCGGGACCAGGCCATAAAGGTTTAGACAGAGGAGGGTCTTTTGAGGACTGCTGGAGACTGGGACCAGGCCATAAAGGTTTAGACAGAGGAGGGTCTTTTGAGGACTGCTGGAGACTGGGACCAGGCCATAAAGGTTTAGACAGAGGAGGGTCTTTTGAGGACTGCTGGAGACTGGGACCAGGCCAAGAGGGGTTAGACGAGGGCTTGAGGCCCGGAGGTCTCTTTCTGCTGGACTCCCACACACACGCTGCCATTCTGCTGGGTGATCAGTGCCATGTTCTCAGGCATAAACTACATAGGCTTATCTCCTGCCCTGCTCTGCTTGGCACAGACACAGCCCAGCTTCTCTCTCTGGGTTCACCTCATACAGCCCTGGCTCTGCTGCTCACTGCTTACTGCTCAGGCCACCCACGACACACAGAGGAACAAAACCCAGTCTGTTAGTTAGACGCAGGAAGCAACATCGAGTCTGTCAGCTAGACGCAGATAGCAACAACCAGTCTGTCAGCTAGACGCAGGAGGCAACATCCAGTCTGTCAGCTAGACGCAGGAGGCAACATCCAGTCTGTCAGCTAGATGCAGGTAGTAAATGGCAAGTCTGCATTACACGTTACTACCAGACCTGGGtattctttcaaatactttcagCCTGTCTGTATTTAGCAAAGATGATAACACATAatcactccagacagacacaagcaaaaactcatgacgtaaatgttgcagcagcctaggctacacctaaacattagaaatctgacatgctgtTTCGGATGAAAGGAGGatttttcagtctgatcaactgttaAAAAAAGccccaccactctgggacctactgtgtggtgccaccagtctgcctGCAGTTGTCAGCTATCgtcaggtatgtggatgatcagggctttattcaggaaGGTTTCTTGGAATACTTGATGTGTCAAGAGGACGAATTTTGAGATGTCTGAGTTTAACTTCATAGAGAAACTCGTTGTCCAAACCTTCGATGGCGcagctgtaatgtaatgtatctgctatttgtatttacagctcagtcccctcctgctccctgattaagaggtgatgactactccactccactaccattgtcaactttctcctgacatgaactgaagccacgtctcatgtgctcgctcatccactggcacattgaatgtttcccCTCCAATCACTttttttgtcttcccagtcaaatcctgtcctgcacttgtcaagcctctgaacacctcaactcatgcctcatacTCTCATTCAATCACGGCTGTGATCCCTTTCCAGCATGgtCATCTCATTCCATTTCACCAAGCCTCCTTCCAACCTAGACTCAGGTACTGTTTTAATCATTTATTCTTGTTCATAAACAGTATTAACACTGTAAGTCTGACCTATAGTTCATTAACAGGTATTAACACTGTAAGTCTGACCTATAGTTCATTAACAGGTATTAACACTGTAAGTCTGACTTATAGTTCATTAACAGGTATTAACACTGTAATTCTGATTTATAGTTCATTAACAGGTATTAACACTGTAAGTCTGACCTATAGTTCATTAACAGGTATTAACACTGTAAGTCTGACTTATAGTTCATTAACAGGTATTAACACAATAAGTCTGACTTATAGTTCATTAACAGGTATTAACACTGTAAGTCTGACTTATAGTTCATTAACAGGTATTAACACTGTAAGTCTGACTTATAGTTCATTAACAGGTATTAACACTGTAAGTCTGACTTATAGTTCATTAACAGGTATTAACACTGTAAGTCTGACCTATAGTTCATTAACAGGTATTAACACAAGTCTGACTTACAGCTTGGCTAATAAATTAATGTGAAAAAGGAAAAGCACATCCTAACACCAGTCCAACTGTTGAAGAATTATGTAACAGGttattttctgtctttctttTGTTGAGGTAAACACCAGAGGAGTTGACGCCAGGCCAGGGGTCCATATGTCACCTTGTCTGCTCTGAGAGATGACTAATAGAACTCTCTGACCTGAGATGTGTTAGGtgctctagttctctctctctctgtctccctgtctctctgtctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcctattcctcTGTAAGGAGTGATGTCTAATGATGTGGCACATACAGGATCAAGCAATGTTGTATGGGGTGGAGGTTTGTGGTAGATAAGCCCTGAGCTTACATGCTTCCTGCCTTTGTCTGTCAGACAGCTGCTTCAAAGACTTACTGTGCAGGCattgatgacacacacacacacacacacacacacacacaca

Function

NR:

description
hypothetical protein EH28_07664

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052768.1 True 2498 mRNA 0.44 3 7791386 7802722

Neighbor

gene id symbol gene type direction distance location
LOC110529176 LOC106571097 coding downstream 101677 7670795 ~ 7689709 (-)
LOC118965488 NA coding downstream 121165 7667747 ~ 7670221 (-)
susd6 LOC106571091 coding downstream 311338 7418331 ~ 7480048 (-)
LOC110529302 LOC106571090 coding downstream 377085 7400907 ~ 7423688 (-)
LOC110529304 LOC106608157 coding downstream 421864 7340699 ~ 7369522 (-)
LOC110529310 LOC106571100 coding upstream 140423 7943145 ~ 7944881 (-)
LOC118965603 NA coding upstream 143563 7946285 ~ 7947278 (-)
LOC110529177 LOC106571102 coding upstream 207348 8010070 ~ 8255412 (-)
LOC110529315 LOC106571103 coding upstream 539646 8342368 ~ 8343912 (-)
LOC110529314 7b2 coding upstream 541300 8344022 ~ 8357681 (-)
G669480 NA non-coding downstream 56032 7734109 ~ 7735354 (-)
G669469 NA non-coding downstream 84425 7706160 ~ 7706961 (-)
G669384 NA non-coding downstream 227266 7563821 ~ 7564120 (-)
G669381 NA non-coding downstream 229962 7561207 ~ 7561424 (-)
G669570 NA non-coding upstream 21944 7824666 ~ 7825026 (-)
G669577 NA non-coding upstream 34410 7837132 ~ 7837335 (-)
G669588 NA non-coding upstream 45948 7848670 ~ 7848946 (-)
G669598 NA non-coding upstream 57385 7860107 ~ 7860602 (-)
G669604 NA non-coding upstream 64947 7867669 ~ 7867883 (-)
G669281 NA other downstream 373151 7416025 ~ 7418235 (-)
G669229 NA other downstream 456672 7325550 ~ 7334714 (-)
G669278 NA other downstream 471183 7317304 ~ 7320203 (-)
G669087 NA other downstream 799774 6989850 ~ 6991612 (-)
G669918 NA other upstream 305149 8107871 ~ 8110958 (-)
G670097 NA other upstream 538268 8340990 ~ 8342120 (-)
G670549 NA other upstream 774329 8577051 ~ 8577780 (-)
G670733 LOC107575789 other upstream 1153371 8949694 ~ 8961731 (-)
G670905 NA other upstream 1461128 9263850 ~ 9265093 (-)

Expression


Co-expression Network