G669598



Basic Information


Item Value
gene id G669598
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 7860107 ~ 7860602 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU762776
ggtccgagatactgttgtgaagaagtttaaagcctgatttggatacaaaaatatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggacgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagatagccatttcttaaagatatccataaaaagtgtcgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagct

Function


NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU762776 True 496 lncRNA 0.43 1 7860107 7860602

Neighbor


gene id symbol gene type direction distance location
LOC118965489 NA coding downstream 57385 7791386 ~ 7802722 (-)
LOC110529176 LOC106571097 coding downstream 170398 7670795 ~ 7689709 (-)
LOC118965488 NA coding downstream 189886 7667747 ~ 7670221 (-)
susd6 LOC106571091 coding downstream 380059 7418331 ~ 7480048 (-)
LOC110529302 LOC106571090 coding downstream 445806 7400907 ~ 7423688 (-)
LOC110529310 LOC106571100 coding upstream 82543 7943145 ~ 7944881 (-)
LOC118965603 NA coding upstream 85683 7946285 ~ 7947278 (-)
LOC110529177 LOC106571102 coding upstream 149468 8010070 ~ 8255412 (-)
LOC110529315 LOC106571103 coding upstream 481766 8342368 ~ 8343912 (-)
LOC110529314 7b2 coding upstream 483420 8344022 ~ 8357681 (-)
G669588 NA non-coding downstream 11161 7848670 ~ 7848946 (-)
G669577 NA non-coding downstream 22772 7837132 ~ 7837335 (-)
G669570 NA non-coding downstream 35081 7824666 ~ 7825026 (-)
G669480 NA non-coding downstream 124753 7734109 ~ 7735354 (-)
G669469 NA non-coding downstream 153146 7706160 ~ 7706961 (-)
G669604 NA non-coding upstream 7067 7867669 ~ 7867883 (-)
G669830 NA non-coding upstream 44113 7904715 ~ 7904966 (-)
G669852 NA non-coding upstream 65937 7926539 ~ 7926789 (-)
G669842 NA non-coding upstream 67527 7928129 ~ 7928461 (-)
G669838 NA non-coding upstream 73025 7933627 ~ 7935093 (-)
G669281 NA other downstream 441872 7416025 ~ 7418235 (-)
G669229 NA other downstream 525393 7325550 ~ 7334714 (-)
G669278 NA other downstream 539904 7317304 ~ 7320203 (-)
G669087 NA other downstream 868495 6989850 ~ 6991612 (-)
G669918 NA other upstream 247269 8107871 ~ 8110958 (-)
G670097 NA other upstream 480388 8340990 ~ 8342120 (-)
G670549 NA other upstream 716449 8577051 ~ 8577780 (-)
G670733 LOC107575789 other upstream 1095491 8949694 ~ 8961731 (-)
G670905 NA other upstream 1403248 9263850 ~ 9265093 (-)

Expression



Co-expression Network