RNA id: TU791034



Basic Information


Item Value
RNA id TU791034
length 329
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G694928
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 30140509 ~ 30140837 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CTTAGCTATAGTTTATTACTCGCCCCCCTCTCCATGCCATCCTGCTGTGGGGCGACCAGTCCAAGTCTCTCCAGGTTCTCATCGACTCGGGGGCCAATGTGAGTCTCATGGATGTTACCCTGGCATtcgagctgggcatccccactcaacTCTTCTCCATTCCCATGTGTGTTAGAGCACTggacgggcgctctataggccAGGTCACCCACCAGACCACCCTTGTCAACCTATGAGGGTCGGGGAACCGCAACGAGACGATCCAATTCCTGCTGGTTGAGTCTCCGcaggttcccgtggtattgggattctcttggctcaAGCGACAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU791033 lncRNA downstream 2526 30137741 ~ 30137983 (-) True G694927
TU791025 lncRNA downstream 14562 30125745 ~ 30125947 (-) True G694919
TU791013 lncRNA downstream 27658 30107806 ~ 30112851 (-) True G694908
TU791009 lncRNA downstream 36279 30103972 ~ 30104230 (-) True G694904
TU791006 lncRNA downstream 40083 30100182 ~ 30100426 (-) True G694901
TU791037 lncRNA upstream 2266 30143103 ~ 30143391 (-) True G694931
TU791038 lncRNA upstream 3918 30144755 ~ 30145042 (-) True G694932
TU791043 lncRNA upstream 9203 30150040 ~ 30151055 (-) True G694937
TU791047 lncRNA upstream 13463 30154300 ~ 30158414 (-) False G694939
TU791048 lncRNA upstream 13463 30154300 ~ 30158311 (-) False G694939
XM_036985251.1 mRNA downstream 78265 30001764 ~ 30062244 (-) True ches1
XM_036985252.1 mRNA downstream 78542 30001764 ~ 30061967 (-) False ches1
XR_005052851.1 mRNA downstream 100498 30038581 ~ 30040011 (-) True LOC118965505
XM_036985247.1 mRNA downstream 154150 29972511 ~ 29986359 (-) False gtf2a1
XM_021612284.2 mRNA upstream 76171 30217008 ~ 30227240 (-) False LOC110529769
XM_021612285.2 mRNA upstream 76171 30217008 ~ 30227240 (-) False LOC110529769
XM_021612286.2 mRNA upstream 76171 30217008 ~ 30227240 (-) False LOC110529769
XM_021612287.2 mRNA upstream 76171 30217008 ~ 30227240 (-) False LOC110529769
XM_036985272.1 mRNA upstream 79035 30219872 ~ 30227240 (-) False LOC110529769
TU790962 other downstream 78341 30001763 ~ 30062168 (-) False G694858
TU790963 other downstream 78341 30038588 ~ 30062168 (-) True G694858
TU789639 other downstream 1181677 28958395 ~ 28958832 (-) True G693665
TU789291 other downstream 1546078 28593341 ~ 28594431 (-) True G693383
TU789000 other downstream 1658611 28478817 ~ 28481898 (-) True si:dkey-85n7.8
TU792305 other upstream 706065 30846902 ~ 30847209 (-) True G696068
TU792310 other upstream 714270 30855107 ~ 30855407 (-) True G696073
TU792778 other upstream 1336517 31477354 ~ 31478027 (-) True G696499
TU792983 other upstream 1516889 31657726 ~ 31679735 (-) True LOC110529793
TU793919 other upstream 2073649 32214486 ~ 32217549 (-) False LOC110529804

Expression Profile