Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1330564 |
| length | 861 |
| lncRNA type | read_through |
| GC content | 0.38 |
| exon number | 3 |
| gene id | G1166778 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 33706813 ~ 33808708 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1330571 | lncRNA | upstream | 13621 | 33692480 ~ 33693352 (+) | True | G1166783 |
| TU1330531 | lncRNA | upstream | 62346 | 33644424 ~ 33644627 (+) | True | G1166755 |
| TU1330509 | lncRNA | upstream | 99394 | 33607354 ~ 33607579 (+) | True | G1166735 |
| TU1330463 | lncRNA | upstream | 161443 | 33543113 ~ 33545530 (+) | True | G1166690 |
| TU1330357 | lncRNA | upstream | 274631 | 33427285 ~ 33432342 (+) | True | G1166590 |
| TU1330948 | lncRNA | downstream | 24481 | 33833189 ~ 33833393 (+) | True | G1167108 |
| TU1330950 | lncRNA | downstream | 25355 | 33834063 ~ 33834294 (+) | True | G1167110 |
| TU1331026 | lncRNA | downstream | 86954 | 33895662 ~ 33944609 (+) | True | G1167184 |
| TU1331184 | lncRNA | downstream | 233433 | 34042141 ~ 34042660 (+) | True | G1167340 |
| TU1331199 | lncRNA | downstream | 245937 | 34054645 ~ 34055394 (+) | True | G1167355 |
| XM_021557554.2 | mRNA | upstream | 53138 | 33637809 ~ 33653835 (+) | False | LOC110486158 |
| XM_036940808.1 | mRNA | upstream | 53138 | 33637809 ~ 33653835 (+) | False | LOC110486158 |
| XM_036940809.1 | mRNA | upstream | 53138 | 33638047 ~ 33653835 (+) | True | LOC110486158 |
| XM_036939716.1 | mRNA | upstream | 367246 | 33336015 ~ 33339727 (+) | True | csf-3 |
| XM_021556174.2 | mRNA | upstream | 367251 | 33335690 ~ 33339722 (+) | False | csf-3 |
| XM_021556220.2 | mRNA | downstream | 410137 | 34218845 ~ 34221786 (+) | False | LOC110485153 |
| XM_021557592.2 | mRNA | downstream | 456676 | 34265384 ~ 34272808 (+) | False | LOC110486176 |
| XM_036940839.1 | mRNA | downstream | 457755 | 34266463 ~ 34272808 (+) | True | LOC110486176 |
| XM_021557593.2 | mRNA | downstream | 468528 | 34277236 ~ 34292574 (+) | False | LOC110486177 |
| XM_036940841.1 | mRNA | downstream | 470014 | 34278722 ~ 34292574 (+) | True | LOC110486177 |
| TU1330025 | other | upstream | 457765 | 33239953 ~ 33249208 (+) | False | G1166318 |
| TU1329888 | other | upstream | 476490 | 33229113 ~ 33230483 (+) | True | LOC110486146 |
| TU1329495 | other | upstream | 984511 | 32715256 ~ 32722462 (+) | True | ifn2 |
| TU1328699 | other | upstream | 1596240 | 32001751 ~ 32110733 (+) | False | LOC110486134 |
| TU1327390 | other | upstream | 2587296 | 31114311 ~ 31119677 (+) | True | LOC110486104 |
| TU1331612 | other | downstream | 872480 | 34681188 ~ 34687650 (+) | True | LOC110486188 |
| TU1333280 | other | downstream | 2181148 | 35989856 ~ 35992600 (+) | True | G1169121 |
| TU1333368 | other | downstream | 2358920 | 36167628 ~ 36168331 (+) | True | G1169207 |
| TU1333369 | other | downstream | 2361188 | 36169896 ~ 36171571 (+) | True | G1169208 |
| TU1333509 | other | downstream | 2529385 | 36338093 ~ 36339356 (+) | True | LOC110486232 |
