Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2078571 |
| length | 245 |
| lncRNA type | sense_over |
| GC content | 0.47 |
| exon number | 2 |
| gene id | trpm2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 47170403 ~ 47260466 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0055085 | transmembrane transport | biological_process |
| GO:0006811 | ion transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0005216 | ion channel activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2078497 | lncRNA | downstream | 7659 | 47118451 ~ 47168499 (-) | False | G1816786 |
| TU2078493 | lncRNA | downstream | 7659 | 47124165 ~ 47168499 (-) | False | G1816786 |
| TU2078485 | lncRNA | downstream | 7659 | 47128271 ~ 47168499 (-) | False | G1816786 |
| TU2078492 | lncRNA | downstream | 7659 | 47154711 ~ 47168499 (-) | False | G1816786 |
| TU2078490 | lncRNA | downstream | 9205 | 47155265 ~ 47166953 (-) | False | G1816786 |
| TU2078602 | lncRNA | upstream | 84785 | 47261251 ~ 47287422 (-) | False | G1816836 |
| TU2078604 | lncRNA | upstream | 84785 | 47261251 ~ 47266877 (-) | False | G1816836 |
| TU2078594 | lncRNA | upstream | 93150 | 47269616 ~ 47276714 (-) | False | G1816836 |
| TU2078598 | lncRNA | upstream | 93150 | 47269616 ~ 47270644 (-) | False | G1816836 |
| TU2078597 | lncRNA | upstream | 104301 | 47280767 ~ 47287422 (-) | True | G1816836 |
| XM_036959445.1 | mRNA | downstream | 72330 | 47086871 ~ 47103828 (-) | True | LOC110501994 |
| XM_036959446.1 | mRNA | downstream | 72353 | 47086871 ~ 47103805 (-) | False | LOC110501994 |
| XM_021579869.2 | mRNA | downstream | 114831 | 47042225 ~ 47061327 (-) | True | LOC110501995 |
| XM_036959444.1 | mRNA | downstream | 202026 | 46869831 ~ 46974132 (-) | False | spopla |
| XM_036959443.1 | mRNA | downstream | 202027 | 46869831 ~ 46974131 (-) | False | spopla |
| XM_036959449.1 | mRNA | upstream | 579 | 47177045 ~ 47260466 (-) | False | trpm2 |
| XM_036959450.1 | mRNA | upstream | 301162 | 47477628 ~ 47553609 (-) | False | cfap65 |
| XM_036959451.1 | mRNA | upstream | 301162 | 47477628 ~ 47553609 (-) | False | cfap65 |
| XM_036959453.1 | mRNA | upstream | 452414 | 47628880 ~ 47632649 (-) | False | LOC110501961 |
| XM_021579839.2 | mRNA | upstream | 452414 | 47628880 ~ 47635640 (-) | True | LOC110501961 |
| TU2077141 | other | downstream | 1335176 | 45838750 ~ 45840982 (-) | True | G1815615 |
| TU2075825 | other | downstream | 2502270 | 44673447 ~ 44673888 (-) | True | G1814480 |
| TU2075666 | other | downstream | 2622738 | 44510407 ~ 44553420 (-) | True | LOC110502171 |
| TU2073410 | other | downstream | 4498398 | 42677257 ~ 42677760 (-) | True | G1812404 |
| TU2073346 | other | downstream | 4571138 | 42604703 ~ 42605020 (-) | True | LOC110502155 |
| TU2078613 | other | upstream | 49085 | 47225551 ~ 47226646 (-) | True | G1816841 |
| TU2078705 | other | upstream | 224656 | 47401122 ~ 47402047 (-) | True | G1816929 |
| TU2079216 | other | upstream | 294828 | 47471294 ~ 47473384 (-) | True | G1817287 |
| TU2079567 | other | upstream | 885583 | 48062049 ~ 48063644 (-) | True | LOC110501953 |
| TU2079734 | other | upstream | 1092321 | 48268787 ~ 48291496 (-) | True | G1817668 |
