RNA id: TU2389600



Basic Information


Item Value
RNA id TU2389600
length 351
lncRNA type sense_over
GC content 0.49
exon number 2
gene id nars2
representative True

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 48401253 ~ 48458439 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CAGACTGCTGACGTTTGGGAGTGCTGTGGAGATCTCAGGAAGCCTGGTCACGAGTCCCAGCCGCAAGCAGGACGTGGAACTGCAGGCTGACCAGATAGATGTGGTTGGAGAATGTAACCCTGTGGACTTCCCCTTTAAGATCAAGGAGAAACATGGTCTGGAATACATCCGTCAGTTTCCCCACCTGAGGTGTAAAACCAACGCCTTCAGTTCCCTGCTGAGAATACGCAGCGAAGCCACCGCTGCTATACAGCAATATTTCAAGGTGAGATGAGACCAATGTTAGACCAGTAGACTAGAATGTCAATCAAAtggatttataaagcccttctaaaaccccaaacagcaagc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2389632 lncRNA upstream 18082 48383952 ~ 48385354 (+) True G2089106
TU2389621 lncRNA upstream 44425 48358662 ~ 48359011 (+) True G2089096
TU2389605 lncRNA upstream 85934 48317256 ~ 48317502 (+) True G2089081
TU2389560 lncRNA upstream 165388 48237198 ~ 48238048 (+) True G2089046
TU2389559 lncRNA upstream 168434 48233043 ~ 48235002 (+) True G2089045
TU2389639 lncRNA downstream 2342 48406817 ~ 48407049 (+) True G2089112
TU2389676 lncRNA downstream 65255 48469730 ~ 48470815 (+) False G2089140
TU2389677 lncRNA downstream 65255 48469730 ~ 48470815 (+) True G2089140
TU2389684 lncRNA downstream 72635 48477110 ~ 48477900 (+) True G2089143
TU2389685 lncRNA downstream 74063 48478538 ~ 48479901 (+) True G2089144
XM_036964775.1 mRNA upstream 84351 47640597 ~ 48319085 (+) False tenm4
XM_036964776.1 mRNA upstream 84351 47640597 ~ 48319085 (+) True tenm4
XM_036965048.1 mRNA upstream 920402 47482390 ~ 47483034 (+) True LOC118944690
XM_021593118.2 mRNA upstream 1326715 47074530 ~ 47076721 (+) True LOC110513068
XM_036965299.1 mRNA upstream 1346515 47020501 ~ 47056921 (+) False prcp
XM_036964907.1 mRNA downstream 55974 48460449 ~ 48624448 (+) True gab2
XM_036964717.1 mRNA downstream 228897 48633372 ~ 48774681 (+) False zmp:0000001236
XM_036964718.1 mRNA downstream 228897 48633372 ~ 48774681 (+) False zmp:0000001236
XM_036965696.1 mRNA downstream 685408 49089883 ~ 49186113 (+) False trpc6b
XM_036965366.1 mRNA downstream 796973 49201448 ~ 49266635 (+) True pgr
TU2389529 other upstream 212074 48188209 ~ 48191362 (+) False G2089020
TU2389530 other upstream 212074 48188209 ~ 48191362 (+) False G2089020
TU2389531 other upstream 212074 48188494 ~ 48191362 (+) True G2089020
TU2389353 other upstream 538607 47854106 ~ 47864829 (+) True G2088870
TU2389165 other upstream 865491 47532422 ~ 47537945 (+) True G2088732
TU2389657 other downstream 28003 48432478 ~ 48455486 (+) True G2089124
TU2390619 other downstream 522500 48926975 ~ 48927292 (+) True G2089906
TU2390650 other downstream 653530 49058005 ~ 49058895 (+) True G2089935
TU2390846 other downstream 908268 49312743 ~ 49316226 (+) True G2090091
TU2390856 other downstream 918694 49323169 ~ 49323603 (+) True LOC118944717

Expression Profile