RNA id: TU2444205



Basic Information


Item Value
RNA id TU2444205
length 203
lncRNA type intronic
GC content 0.54
exon number 1
gene id G2137181
representative True

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 40625083 ~ 40625285 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


atcgggggaaaagggccttggtcagggaagtgaccaagaacctgatggtcactctgacagagctccagagttcctctgtggagatgggagaaccttccagaaggacaaccatctctgcagcactccaccaatcaggcctttatgatagagtggccagacggaagccactcctcagtaaaaggcacatgacagcccgcttggag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2444203 lncRNA downstream 1209 40623559 ~ 40623874 (-) True G2137179
TU2444165 lncRNA downstream 52885 40571887 ~ 40572198 (-) True G2137144
TU2444160 lncRNA downstream 64786 40559920 ~ 40560297 (-) True G2137139
TU2444150 lncRNA downstream 91685 40530263 ~ 40533398 (-) True G2137130
TU2444134 lncRNA downstream 116328 40501355 ~ 40508755 (-) True G2137120
TU2444208 lncRNA upstream 18205 40643490 ~ 40643825 (-) True G2137184
TU2444211 lncRNA upstream 21611 40646896 ~ 40647105 (-) True G2137187
TU2444212 lncRNA upstream 22465 40647750 ~ 40648058 (-) True G2137188
TU2444214 lncRNA upstream 23502 40648787 ~ 40649005 (-) True G2137190
TU2444217 lncRNA upstream 28686 40653971 ~ 40654236 (-) True G2137193
XR_005040257.1 mRNA downstream 16949 40605216 ~ 40608134 (-) True LOC118944865
XR_005040272.1 mRNA downstream 25763 40597260 ~ 40599320 (-) True LOC118944871
XM_036966055.1 mRNA downstream 37151 40452316 ~ 40587932 (-) True LOC110508251
XM_036966056.1 mRNA downstream 61584 40452316 ~ 40563499 (-) False LOC110508251
XM_036966347.1 mRNA downstream 307572 40168411 ~ 40317511 (-) False LOC110508253
XM_036966860.1 mRNA upstream 59106 40684391 ~ 40739695 (-) False zfyve9a
XM_036966858.1 mRNA upstream 59106 40684391 ~ 40739696 (-) False zfyve9a
XM_036966861.1 mRNA upstream 59106 40684391 ~ 40739696 (-) False zfyve9a
XM_036966862.1 mRNA upstream 59106 40684391 ~ 40739696 (-) False zfyve9a
XM_036966863.1 mRNA upstream 59106 40684391 ~ 40739696 (-) False zfyve9a
TU2444112 other downstream 149382 40472088 ~ 40475701 (-) False G2137111
TU2444111 other downstream 149382 40472255 ~ 40475701 (-) False G2137111
TU2444115 other downstream 149382 40472255 ~ 40475701 (-) False G2137111
TU2444116 other downstream 149382 40472255 ~ 40475701 (-) False G2137111
TU2444084 other downstream 209543 40415303 ~ 40415540 (-) True G2137086
TU2444510 other upstream 635515 41260800 ~ 41261271 (-) True G2137419
TU2444707 other upstream 1005376 41630661 ~ 41631383 (-) False LOC110509166
TU2444670 other upstream 1106429 41731714 ~ 41736389 (-) True G2137555
TU2444782 other upstream 1185510 41810795 ~ 41814201 (-) True G2137648
TU2444984 other upstream 1595637 42220922 ~ 42226364 (-) False G2137814

Expression Profile