RNA id: TU95317


Basic Information

Item Value
RNA id TU95317
length 494
RNA type TUCP
GC content 0.49
exon number 3
gene id G71261
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 7796173 ~ 7807092 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

aaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtctgtctgtctgtctgtctgtctgtctgtgtgtgtgtgtctgtctgtctgtgtgtgtgtctgtctgtgtgtgtgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtgtgtgtctgtgtgtctgtgtgtttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcagtgagagAAGACGAGACTGCAAAGTCAGTTACATCATGTCcccatgtctgtctgtctgtctgtctgtatgtatgtatgtgtgtgtgtctgtctgtctgtctctctttgtctgtctgtctatctgtctgcctgtctttctGCCTGCCTGACTGTccacctgcctgcc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU95313 lncRNA downstream 10428 7783944 ~ 7785745 (-) False ppox
TU95129 lncRNA downstream 256010 7539195 ~ 7540163 (-) True G71115
TU95124 lncRNA downstream 272394 7520910 ~ 7523779 (-) True G71111
TU95117 lncRNA downstream 276167 7509384 ~ 7520006 (-) True G71106
TU95059 lncRNA downstream 385995 7409408 ~ 7410178 (-) True G71064
TU95354 lncRNA upstream 281063 8088155 ~ 8106258 (-) False G71292
TU95356 lncRNA upstream 281063 8088155 ~ 8097297 (-) True G71292
TU95368 lncRNA upstream 305589 8112681 ~ 8113299 (-) True G71301
TU95429 lncRNA upstream 311251 8118343 ~ 8121432 (-) True G71353
TU95447 lncRNA upstream 386967 8194059 ~ 8198860 (-) True G71365
XM_039805057.1 mRNA downstream 28402 7742631 ~ 7767771 (-) True LOC120561802
XM_039805056.1 mRNA downstream 65337 7719852 ~ 7730836 (-) False LOC120561801
XM_039805055.1 mRNA downstream 65338 7719852 ~ 7730835 (-) True LOC120561801
XM_039805053.1 mRNA downstream 78249 7710428 ~ 7717924 (-) True LOC120561798
XM_039806243.1 mRNA downstream 140211 7613459 ~ 7655962 (-) True taf2
XM_039805063.1 mRNA upstream 64426 7871518 ~ 7880386 (-) True fbl
XM_039807063.1 mRNA upstream 117147 7924239 ~ 7950996 (-) True LOC120563056
XM_039806543.1 mRNA upstream 155863 7962955 ~ 7966391 (-) True ggctb
XM_039806877.1 mRNA upstream 164146 7971238 ~ 8028907 (-) True LOC120562929
XM_039804936.1 mRNA upstream 252290 8059382 ~ 8077756 (-) True cnot10
XR_005639915.1 other downstream 186314 7575365 ~ 7609859 (-) False enpp2
TU95121 other downstream 296020 7497063 ~ 7500153 (-) True G71108
XR_005639715.1 other downstream 1978984 5816245 ~ 5817189 (-) False LOC120562243
XR_005639743.1 other downstream 2639843 5155932 ~ 5156330 (-) False LOC120562332
XR_005639742.1 other downstream 3351120 4411134 ~ 4445053 (-) False cep76
TU95328 other upstream 99708 7906800 ~ 7909302 (-) True G71269
TU95337 other upstream 232233 8039325 ~ 8041777 (-) True G71278
TU95430 other upstream 310409 8117501 ~ 8121432 (-) False G71353
TU95436 other upstream 366146 8173238 ~ 8178832 (-) False LOC120561898
TU95468 other upstream 574136 8381228 ~ 8385140 (-) True G71384

Expression Profile