RNA id: XR_005639915.1


Basic Information

Item Value
RNA id XR_005639915.1
length 2775
RNA type transcript
GC content 0.53
exon number 23
gene id enpp2
representative False

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 7571363 ~ 7610514 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ccaactacagtCATTAGGTATGAGATAAAAATcttttaattacattaatttggTTTAGTTGCTGCCCAAAACGGCTCTGGTGCTGCACCTAACCCCCTATAACAGACGGGGAAACCCTGGTCTCGCATGTTTGGCTCTCTATCCTGGGCTGACCTGCAGTCCTTTGATAAAAGGCTACCCTACCACATGGACACCTCCAGCTCCGGTGTCGTATTGGCTGGTAAACTGGCTGCATTAAACCCTCCTCATGTTTCTTCCACGCTTTCCCTGTATCATCTGAGTCGCGGCTGAGATAGGAGCCCTCCTCTTACCCAACACCAATAAAACTCCGGTGCGCTCCTCTCCGTCacctcccccctcccttccttccttccttccttctgccTCCTGTTCTGTTCAACGGCCCTCCTCTCCGGTGGTCCTCAGCATCACTCACTGTCCGACCTACAGCACAGGAGTACGCTCAGCCCGGCGCAGAAACATGTTCCTTCACAAACCGTTTGTTTGGGTCCTGTCGGTCCTGTGTGCCACTGACGTGTGTTGGGGATTTGTCTACGACCGGCCCCGACGCTCCGGAGAGGACGGGACTCCAACCAGGACAGAGTCCCGCTCTGCGCCTCAGTATGTGGCCACCTCCGGCTCCTGCAGGAACCGGTGCTTTGAGCTGCTGGAGCTGGAGCCGCCCAACTGCCGCTGTGACAACCTGTGTAAGACGTACAGCGGCTGCTGCTCGGACTTTGATCAGCTCTGCCTCCGGACAGAGGGGGGCTATGAGTGCAGTAAGGATCGCTGTGGGGAGACTCGGAATGAACAACATGCCTGCCACTGCTCTGATGACTGTCTGGCCAGAGGAGACTGTTGCACCAACTACAAGTCTCTGTGTAAAGGGGACAGTTCATGGCTGCAGGATGAGTGTGAGGAGATCAAGACAGCTGAATGTCCTGCTGGgTTTTTGCGCCCGCCACTCATCATGCTGTCAGTGGATGGATTTCGAGCTTCTTATATGAAGAGAGGAAGCGCTGTCATACCCAACATCGAGAAACTGAGAACATGTGGATCCCATGCTCCATACATGAGGCCTGTTTACCCGTCAAAAACCTTCCCCAACCTCTACTCACTGGCTACGGGTCTTTACCCAGAGTCTCATGGTATCATCGGCAACTCCATGCATGACCCGCTGTTTGATGCCACCTTCACGCTGAGAGGCCGAGAGAAACTCAGTCACCGCTGGTGGGGTGGACAGCCAATCTGGATCACAGCACTCAAACAGGGAGTGAAGGCTGCCACCTTCTTCTGGCCTGTtgcTATCCCATTGGAGAGGCGCATACTGACCATGCTGCAGTGGCTCCACCTCCCTGAAGCGGAGAGGCCCTACGTTTACGCCATGCACTCTGAACAACCAGACATATATGGACACAAAATGGGACCCATGAGCATAGAATTGAACAACCCTCTGAGGATGATTGACAGAATTGTTGGCCAACTGATGGACGGACTTAAACAGATGAAACTGCACCGTTGTGTCAACATCATCCTGGTGGGGGATCAtgGTATGGAGGAAGCCCACTGTGATCGTACCGAGTTCCTCAGTAACTACATGACCAACGTTGATGACATCATCCTCATCCCGGGGTCTCTAGGCAGAATACGCTCAAGATACCCCAACAACCCGAAATataaCCCCAAGGCTGTTGTTGCAAATCTAACATGTAAAAAGGCAGACCAGCACTTCAAGCCGTACTTGAAGCAGCACCTGCCTAAGAGACTGCACTACGCCAACAACCGACGCATCGAAGACATTCACCTGCTGGTGGAGAGGAAGTGGCACGTTGCCAGGAAAGCTCCGGAAGGGAAGAGGCACTGTGGCTTCTCTGGGGACCATGGATATGACAATAAGATCAACAGCATGCAGACTATTTTCTTGGGGTATGGACCTACATTTAAATTCAAGACTAAAGTTCCAGCCTTTGAAAACATTGAGCTTTATAATGTCATGTGTGATCTTCTGGGTCTGAAACCAGCTCCCAATAACGGAACCCATGGCAGTCTGAACCACCTGCTGAGAAGCCCCCCCTACAGGCCCACCATGCCGGAGGAGGTTTCTAGGCCAGCGGCCTCTGGTCTGGTTGATGGGGGTAAAGAGGACCTGGGCTGCAGCTGCGAAGACAAGTTGCGTGTAAAAAGTAGGGGCCAGAGAAGTTTGAAAGTGACCCTTGTACGAGGCTATAACCTGGAGTCACTCTGGCTCTGTCTCTTACAGAACAAAGTGGAGGAGCTAAACCAGCGACTGAGGCAAGCTATTGATGCAGGAACCTGCCGTACGGTCGGCCTGCTGTACTCTTCCGTACCAAATACTCCATCCTCCACCACAGTGACTTCATCAGCGGCTACAGCGAGGCTCTCTCCATGCCTCTCTGGACATCCTACTCCGTCAGCAGACAGgtggaaGTGTCCCCTCTGCCTGAAGCCCTGTCCAACTGTGTGCGAGCTGACAGCAGAGTCCCTCCAGCCTACAGTCAGTCCTGTACCAACTACAGATCCGACAGACAGATCAGCTACGCCTTCCTGTTCCCGCCACAGTTATCCTCAGCCATAGACAAAAAATATGATGCCGTCCTCATCACCAACACCGTTCCCATGTATCCTGCGTTCAAAAGAATATGGAGTTACTTCCAGAGAGCACTGGTGAAGAAATATGCCACCGAGAGAAACGGAGTGAATGTGCTCGTTGGACCCATATTTGACTACAACTATGATGGTGTCAGCGACTCGGCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU95129 lncRNA downstream 35202 7539195 ~ 7540163 (-) True G71115
TU95124 lncRNA downstream 51586 7520910 ~ 7523779 (-) True G71111
TU95117 lncRNA downstream 55359 7509384 ~ 7520006 (-) True G71106
TU95059 lncRNA downstream 165187 7409408 ~ 7410178 (-) True G71064
TU95057 lncRNA downstream 166210 7408949 ~ 7409155 (-) True G71062
TU95305 lncRNA upstream 129004 7738863 ~ 7820862 (-) True G71254
TU95313 lncRNA upstream 174085 7783944 ~ 7785745 (-) False ppox
TU95354 lncRNA upstream 478296 8088155 ~ 8106258 (-) False G71292
TU95356 lncRNA upstream 478296 8088155 ~ 8097297 (-) True G71292
TU95368 lncRNA upstream 502822 8112681 ~ 8113299 (-) True G71301
XM_039805852.1 mRNA downstream 30828 7524827 ~ 7544537 (-) True nod1
XM_039805853.1 mRNA downstream 39194 7506528 ~ 7536171 (-) False nod1
XM_039805850.1 mRNA downstream 39194 7511263 ~ 7536171 (-) False nod1
XM_039805851.1 mRNA downstream 39194 7515961 ~ 7536171 (-) False nod1
XM_039805849.1 mRNA downstream 39194 7524827 ~ 7536171 (-) False nod1
XM_039806243.1 mRNA upstream 3600 7613459 ~ 7655962 (-) True taf2
XM_039805053.1 mRNA upstream 100569 7710428 ~ 7717924 (-) True LOC120561798
XM_039805056.1 mRNA upstream 109993 7719852 ~ 7730836 (-) False LOC120561801
XM_039805055.1 mRNA upstream 109993 7719852 ~ 7730835 (-) True LOC120561801
XM_039805057.1 mRNA upstream 132772 7742631 ~ 7767771 (-) True LOC120561802
TU95121 other downstream 75212 7497063 ~ 7500153 (-) True G71108
XR_005639715.1 other downstream 1758176 5816245 ~ 5817189 (-) False LOC120562243
XR_005639743.1 other downstream 2419035 5155932 ~ 5156330 (-) False LOC120562332
XR_005639742.1 other downstream 3130312 4411134 ~ 4445053 (-) False cep76
XR_005639741.1 other downstream 3130312 4411134 ~ 4445053 (-) False cep76
TU95317 other upstream 186314 7796173 ~ 7807092 (-) True G71261
TU95328 other upstream 296941 7906800 ~ 7909302 (-) True G71269
TU95337 other upstream 429466 8039325 ~ 8041777 (-) True G71278
TU95430 other upstream 507642 8117501 ~ 8121432 (-) False G71353
TU95436 other upstream 563379 8173238 ~ 8178832 (-) False LOC120561898

Expression Profile