RNA id: TU123744


Basic Information

Item Value
RNA id TU123744
length 440
RNA type TUCP
GC content 0.54
exon number 2
gene id G91938
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 178709 ~ 272666 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tgttcccacagccctatggtcccacagccctatgttcccacagccctatgttctcacagccctatgttcccacagccctatgttcccacagccctatgttcccacagccctatgttcccacagccctatgttcctacaaccctatgttcccacaaccctatgttcccacaaccctatgttcccacagccctatgttcccacagccctatgttcccacaaccctatgttcccacagccctatgttcctacagccctatgttcccacagcccaatggtcccacagccctatgttcccacagctctatgttcccacagctttatgttcccacagccctatgttcccacagccctatgttcccacagccctatgttcccacagtcctatgttcccacagccctatgttcccacagccctatggtcccacagccctatgttccca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123736 lncRNA downstream 26735 151573 ~ 151974 (-) True G91933
TU123724 lncRNA downstream 49527 107291 ~ 129182 (-) True G91928
TU123729 lncRNA downstream 68514 109660 ~ 110195 (-) False G91929
TU123717 lncRNA downstream 83390 93830 ~ 95319 (-) False G91922
TU123716 lncRNA downstream 84307 92698 ~ 94402 (-) True G91922
TU123751 lncRNA upstream 14052 286718 ~ 293940 (-) True G91943
TU123759 lncRNA upstream 33568 306234 ~ 306643 (-) True G91949
TU123772 lncRNA upstream 64742 337408 ~ 423652 (-) False G91958
TU123782 lncRNA upstream 79077 351743 ~ 353360 (-) True G91963
TU123783 lncRNA upstream 79880 352546 ~ 353360 (-) False G91963
XM_039812186.1 mRNA upstream 109267 381933 ~ 453128 (-) False LOC120566001
XM_039812187.1 mRNA upstream 109268 381934 ~ 406721 (-) True LOC120566001
XM_039811442.1 mRNA upstream 269372 542038 ~ 549410 (-) True LOC120565555
XM_039811996.1 mRNA upstream 281041 553707 ~ 566714 (-) True LOC120565889
XM_039811443.1 mRNA upstream 323571 596237 ~ 635055 (-) True patj
TU123726 other downstream 68514 109660 ~ 110195 (-) True G91929
TU123702 other downstream 96835 80795 ~ 81874 (-) True G91909
TU123830 other upstream 281067 553733 ~ 566721 (-) False LOC120565889
TU123850 other upstream 411293 683959 ~ 684519 (-) True G92012
TU124370 other upstream 702603 975269 ~ 982737 (-) False LOC120565586
TU124371 other upstream 702629 975295 ~ 982737 (-) False LOC120565586
TU124422 other upstream 830526 1103192 ~ 1129854 (-) False LOC120565934

Expression Profile