RNA id: TU124067


Basic Information

Item Value
RNA id TU124067
length 1203
RNA type TUCP
GC content 0.52
exon number 2
gene id G92169
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 1241387 ~ 1256194 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTTGAGCACTTCTACTTTATTTCACACATAACTTTATAACTTGAATAATTTCAGATCCacccaaaaatacaaaaacccaaacGTTCTTTTATACACCTTTACAGTTAGTCTGTCGCTACGGAAACACAACGCAGGACAAGTTCTGGACCAGTGGGATCGGTTCTGTAACAGAAACAACGCAGTTTGTAACAGTCTGCAGCCGGGCCGGAACCAGAGTCCCCAAAAACCCACCGCGGTATTatttacaactttcagacatcGCTCAGATGTTACAGAGGACACACGGACACGTTACACCAACCGGTTCTGATCCGAGGTCTCTCGTTTagtgtagggatgcaccgaaaccAGGACTGGGCTTctgattgggctgaatatttgggctttttgacgggatTACAGGAAGGTGTTAATGTAGGTGGAGCgctcaatgcagcaggctgtgagaaagtggacatgctCACCAGAGCAGAAcatgttgtttggcagaactttcagtcaaaagaaggccattcaagtccagctacatgttcaattctcaatgctgattggtctggtggtggcgaggaccctaaactacacacaacatggccgctgttacaacatctggtctgaaacatctgaaagaatacgagttgtgcacgaaggaatctccagacagcagccagaatgcagcaacttcaggtacggcaaaggaaggacagtccctgtttacttcattcatgagtttactgggttcatggactgaggatgggaggaggagtcagcaccatcTCAACCAGGGGAGTCAGGATTCAGAAAAACCCCAATAATCTGGATTCAGTGCGTTTTTAATTTCTTGGTCAGGCTGCTCGGCTGGAATCGGCCCTGAAAGTGAACCGTGTTGGTGTTTTACGGCGGCGTACCTTTGAGCGGCTCGGTGACGTCCTTCCCGGTGAAGACGGGTCTGGGCGTGGCGGGCGGAGGTTTGGCGGCGGCGGCCGCGGTGGTAGCGGGCCGGGCGGTTGCCGTGGCGGCCGGGGCCGGAGGCGGAGTCTGGATCTCCTGGAACAGAGTCGGAGGGATGATGGCGCCCGTCTGCTTCGCCAGGAAGTTCAGGATGTCTTCCTTCAGGATGCGTCCGTCTCTCCCCGTCCCCACAACCTCGCTGAGTTTGATCTGAGGGCAGAGGGAACGTCAGGGGTCAGACGCACTTTAACCAGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123944 lncRNA upstream 23 1216590 ~ 1241364 (+) False G92071
TU123940 lncRNA upstream 3419 1205083 ~ 1237968 (+) False G92071
TU123949 lncRNA upstream 6590 1217304 ~ 1234797 (+) True G92074
TU124063 lncRNA upstream 10660 1230117 ~ 1230727 (+) True G92166
TU123943 lncRNA upstream 21938 1218488 ~ 1219449 (+) False G92071
TU123954 lncRNA downstream 42964 1299158 ~ 1327538 (+) True G92079
TU124088 lncRNA downstream 56809 1313003 ~ 1357868 (+) True G92177
TU123951 lncRNA downstream 100684 1356878 ~ 1407682 (+) True G92076
TU123950 lncRNA downstream 112828 1369022 ~ 1651313 (+) True G92075
TU123930 lncRNA downstream 125134 1381328 ~ 1385015 (+) True G92069
XM_039811451.1 mRNA upstream 12708 1222333 ~ 1228679 (+) True trmt13
XM_039811799.1 mRNA upstream 216244 1010747 ~ 1025143 (+) True plppr3b
XM_039812306.1 mRNA upstream 232174 983651 ~ 1009213 (+) True med16
XM_039811565.1 mRNA upstream 286151 886359 ~ 955236 (+) True grin3bb
XM_039811566.1 mRNA upstream 286151 891578 ~ 955236 (+) False grin3bb
XM_039812460.1 mRNA downstream 66211 1322405 ~ 1380914 (+) True LOC120566171
XM_039811453.1 mRNA downstream 281805 1537999 ~ 1574777 (+) True LOC120565564
XM_039811454.1 mRNA downstream 369380 1625574 ~ 1630680 (+) True LOC120565565
XM_039811455.1 mRNA downstream 379769 1635963 ~ 1637498 (+) True sid1
XM_039811456.1 mRNA downstream 611527 1867721 ~ 1889087 (+) True LOC120565570
TU124060 other upstream 16579 1220810 ~ 1224808 (+) False trmt13
TU124057 other upstream 16579 1221373 ~ 1224808 (+) False trmt13
TU124050 other upstream 37341 1202887 ~ 1204046 (+) True G92157
TU124034 other upstream 71341 1168821 ~ 1170046 (+) True G92146
TU123859 other upstream 482411 722373 ~ 758976 (+) True G92019
TU124103 other downstream 207621 1463815 ~ 1535856 (+) False LOC120565410
TU124120 other downstream 322761 1578955 ~ 1910061 (+) True G92201
TU124157 other downstream 440780 1696974 ~ 1804395 (+) True G92234
TU124195 other downstream 611458 1867652 ~ 2000993 (+) True G92264
TU124197 other downstream 611458 1867652 ~ 1996750 (+) False G92264

Expression Profile