RNA id: TU124212


Basic Information

Item Value
RNA id TU124212
length 256
lncRNA type inter_gene
GC content 0.39
exon number 2
gene id G92275
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 1959852 ~ 1960134 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CTGCATTTTGAAATATTCTTTGGTCTCTTTgttttcatctgtgtgtgtgtatgtttgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtttgtgagtgtgtgtgtgtgtgtttgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtttgtgtgtatgtattctgAAGGATCATTATCTATGATCAGACATTATTTGTGAAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU124211 lncRNA upstream 5925 1952986 ~ 1953927 (+) True G92274
TU124117 lncRNA upstream 49791 1909232 ~ 1910061 (+) False G92201
TU124121 lncRNA upstream 49791 1909232 ~ 1910061 (+) False G92201
TU124204 lncRNA upstream 83538 1874886 ~ 1876314 (+) False LOC120565570
TU124185 lncRNA upstream 128995 1804469 ~ 1830857 (+) True G92257
TU124216 lncRNA downstream 22383 1982517 ~ 1983028 (+) True G92276
TU124217 lncRNA downstream 22383 1982517 ~ 1983028 (+) False G92276
TU124231 lncRNA downstream 49134 2009268 ~ 2048527 (+) True G92279
TU124234 lncRNA downstream 49845 2009979 ~ 2010670 (+) False G92281
TU124235 lncRNA downstream 49845 2009979 ~ 2010670 (+) True G92281
XM_039811232.1 mRNA upstream 50853 1891554 ~ 1908999 (+) True serpinc1
XM_039811233.1 mRNA upstream 50853 1893702 ~ 1908999 (+) False serpinc1
XM_039811456.1 mRNA upstream 70765 1867721 ~ 1889087 (+) True LOC120565570
XM_039811455.1 mRNA upstream 322354 1635963 ~ 1637498 (+) True sid1
XM_039811454.1 mRNA upstream 329172 1625574 ~ 1630680 (+) True LOC120565565
XM_039811459.1 mRNA downstream 20704 1980838 ~ 1993868 (+) True LOC120565574
XM_039811460.1 mRNA downstream 34685 1994819 ~ 2024965 (+) False LOC120565575
XM_039811243.1 mRNA downstream 90828 2050962 ~ 2071903 (+) False dph5
XM_039811242.1 mRNA downstream 90830 2050964 ~ 2063004 (+) True dph5
XM_039811244.1 mRNA downstream 411920 2372054 ~ 2379851 (+) False reep6
TU124120 other upstream 49791 1578955 ~ 1910061 (+) True G92201
TU124157 other upstream 155457 1696974 ~ 1804395 (+) True G92234
TU124103 other upstream 423996 1463815 ~ 1535856 (+) False LOC120565410
TU124067 other upstream 703658 1241387 ~ 1256194 (+) True G92169
TU124060 other upstream 735044 1220810 ~ 1224808 (+) False trmt13
TU124125 other downstream 28674 1988808 ~ 2025931 (+) True LOC120565575
TU124251 other downstream 112048 2072182 ~ 2076104 (+) True G92293
TU124333 other downstream 405986 2366120 ~ 2368316 (+) False G92333
TU124352 other downstream 411854 2371988 ~ 2380260 (+) False reep6
TU124353 other downstream 411854 2371988 ~ 2380260 (+) True reep6

Expression Profile