RNA id: TU124231


Basic Information

Item Value
RNA id TU124231
length 421
lncRNA type sense_over
GC content 0.48
exon number 3
gene id G92279
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 2009268 ~ 2048527 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acacacacacacacagacacacacacacacacacacacacacacagacacacagacatacacagacacacacacacacacacacagacacacacacacacacacacacacacacagacacacacacacacacagacacacacacacacacacacagacagacacacacacacacacacacacacacagacacacacacagacaaacaaacacacacacacacacagacacacacacacagacacacacacacaccgagacacacacacagacacacacacacacacagacacacacacacacagacacacacacacacacatacatacacagagacacacacacacacacacacacacatacacacagacacacacacacacacatacacacatacacacacacacacacacatacacaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU124216 lncRNA upstream 26240 1982517 ~ 1983028 (+) True G92276
TU124217 lncRNA upstream 26240 1982517 ~ 1983028 (+) False G92276
TU124212 lncRNA upstream 49134 1959852 ~ 1960134 (+) True G92275
TU124213 lncRNA upstream 49134 1959852 ~ 1960134 (+) False G92275
TU124211 lncRNA upstream 55341 1952986 ~ 1953927 (+) True G92274
TU124131 lncRNA downstream 11458 2059985 ~ 2061269 (+) True G92210
TU124224 lncRNA downstream 21772 2070299 ~ 2083911 (+) False G92278
TU124250 lncRNA downstream 23655 2072182 ~ 2074655 (+) False G92293
TU124226 lncRNA downstream 28083 2076610 ~ 2093751 (+) False G92278
TU124254 lncRNA downstream 28550 2077077 ~ 2077775 (+) True G92294
XM_039811459.1 mRNA upstream 15400 1980838 ~ 1993868 (+) True LOC120565574
XM_039811232.1 mRNA upstream 100269 1891554 ~ 1908999 (+) True serpinc1
XM_039811233.1 mRNA upstream 100269 1893702 ~ 1908999 (+) False serpinc1
XM_039811456.1 mRNA upstream 120181 1867721 ~ 1889087 (+) True LOC120565570
XM_039811455.1 mRNA upstream 371770 1635963 ~ 1637498 (+) True sid1
XM_039811243.1 mRNA downstream 2435 2050962 ~ 2071903 (+) False dph5
XM_039811242.1 mRNA downstream 2437 2050964 ~ 2063004 (+) True dph5
XM_039811244.1 mRNA downstream 323527 2372054 ~ 2379851 (+) False reep6
XM_039811245.1 mRNA downstream 323527 2372054 ~ 2379851 (+) False reep6
XM_039811234.1 mRNA downstream 363704 2412231 ~ 2420605 (+) True LOC120565427
TU124195 other upstream 8275 1867652 ~ 2000993 (+) True G92264
TU124197 other upstream 12518 1867652 ~ 1996750 (+) False G92264
TU124120 other upstream 99207 1578955 ~ 1910061 (+) True G92201
TU124157 other upstream 204873 1696974 ~ 1804395 (+) True G92234
TU124103 other upstream 473412 1463815 ~ 1535856 (+) False LOC120565410
TU124251 other downstream 23655 2072182 ~ 2076104 (+) True G92293
TU124333 other downstream 317593 2366120 ~ 2368316 (+) False G92333
TU124352 other downstream 323461 2371988 ~ 2380260 (+) False reep6
TU124353 other downstream 323461 2371988 ~ 2380260 (+) True reep6
TU124750 other downstream 485217 2533744 ~ 2582371 (+) True G92575

Expression Profile