RNA id: TU125048


Basic Information

Item Value
RNA id TU125048
length 229
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G92799
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 3106455 ~ 3186576 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgttcttgttcaactatattcgtggggtccaaaagccaggagtccagtatacttgtggggtcccgacagctttgtggggccaaaatgctggacccccccaagtttaaagggctgtttgagggttaagacttggttttaggattagggatagaattaggttatggttagggttagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU125034 lncRNA upstream 13990 3165682 ~ 3172182 (+) True G92786
TU125025 lncRNA upstream 23162 3131064 ~ 3163010 (+) False G92784
TU125023 lncRNA upstream 23298 3064817 ~ 3162874 (+) False G92784
TU125031 lncRNA upstream 23298 3075161 ~ 3162874 (+) False G92784
TU125021 lncRNA upstream 23298 3110437 ~ 3162874 (+) False G92784
TU125085 lncRNA downstream 165191 3351767 ~ 3399599 (+) False G92826
TU125097 lncRNA downstream 165191 3351767 ~ 3353933 (+) False G92826
TU125106 lncRNA downstream 175516 3362092 ~ 3421936 (+) True G92827
TU125103 lncRNA downstream 212967 3399543 ~ 3464206 (+) False G92826
TU125133 lncRNA downstream 218487 3405063 ~ 3452057 (+) True G92839
XM_039811247.1 mRNA upstream 183633 2999620 ~ 3002539 (+) True LOC120565438
XM_039811246.1 mRNA upstream 327054 2845744 ~ 2859118 (+) True LOC120565437
XM_039811225.1 mRNA upstream 345313 2821642 ~ 2840859 (+) True LOC120565422
XM_039811224.1 mRNA upstream 592189 2586515 ~ 2593983 (+) True LOC120565421
XM_039811240.1 mRNA upstream 724575 2450531 ~ 2461597 (+) True LOC120565432
XM_039811502.1 mRNA downstream 31150 3217726 ~ 3574149 (+) True LOC120565597
XM_039811258.1 mRNA downstream 151256 3337832 ~ 3348216 (+) True LOC120565455
XM_039812269.1 mRNA downstream 443608 3630184 ~ 3633365 (+) True LOC120566051
XM_039812272.1 mRNA downstream 443608 3630184 ~ 3633365 (+) False LOC120566051
XM_039812271.1 mRNA downstream 443608 3630184 ~ 3633365 (+) False LOC120566051
TU125014 other upstream 53968 3125889 ~ 3132204 (+) True G92782
TU124988 other upstream 91762 3011766 ~ 3094410 (+) True G92773
TU124992 other upstream 91762 3011766 ~ 3094410 (+) False G92773
TU124998 other upstream 171319 3010674 ~ 3014853 (+) False G92773
TU124983 other upstream 203158 2982226 ~ 2983014 (+) True G92770
TU125102 other downstream 165191 3351767 ~ 3366729 (+) True G92826
TU125125 other downstream 299203 3485779 ~ 3490360 (+) True G92838
TU125164 other downstream 371421 3557997 ~ 3577980 (+) False LOC120565459
TU125178 other downstream 405529 3592105 ~ 3593384 (+) False LOC120565459
TU125177 other downstream 414402 3600978 ~ 3606825 (+) True G92848

Expression Profile