RNA id: TU132259


Basic Information

Item Value
RNA id TU132259
length 348
lncRNA type inter_gene
GC content 0.62
exon number 2
gene id G98014
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 24784796 ~ 24785342 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CGCGTGCCTCGGGCAGGTTGGTGCACATGGCCAGACGTTCACGCATCACCACATCAGGGTAGTGGGTCTTCTGGAACGTTTTCTCCAGGGCCTCCAGCTGCTGGGCGGTGAAGGCTGTCCGACTGCGCCGCTGCTTTCGGTGCTGGGAGCCATACCGGGCCTCAAGGATAATGTCTTGAAATGTGCAGCCAGCCAGTCTCTCTGCCAGAGTGAGGGCATGCACTGAGGGCCTGTAGTCAGGGGCGTGCTGGGCTTGTTGCGCCGCCTGCTGGTGGAGGTTGTACATGGCGCTCAGTGAGTTCATGGCGTGGAGAGAGTAGCCGTTCACCCCGTAGTGCTGCATGGCCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU132243 lncRNA upstream 19571 24749028 ~ 24765225 (+) True LOC120565649
TU132146 lncRNA upstream 142711 24638466 ~ 24642085 (+) True G97938
TU132089 lncRNA upstream 271763 24511971 ~ 24513033 (+) True G97896
XR_005640189.1 lncRNA upstream 419621 24309609 ~ 24365175 (+) True LOC120565067
TU131983 lncRNA upstream 528715 24254470 ~ 24256081 (+) True G97807
TU132260 lncRNA downstream 1989 24787331 ~ 24787540 (+) True G98015
TU132266 lncRNA downstream 48095 24833437 ~ 24835517 (+) False G98019
TU132267 lncRNA downstream 48095 24833437 ~ 24835517 (+) False G98019
TU132269 lncRNA downstream 48095 24833437 ~ 24835517 (+) False G98019
TU132270 lncRNA downstream 48095 24833437 ~ 24835517 (+) False G98019
XM_039810187.1 mRNA upstream 9136 24765447 ~ 24775660 (+) True LOC120564918
XM_039811563.1 mRNA upstream 30927 24749017 ~ 24753869 (+) False LOC120565649
XM_039812166.1 mRNA upstream 51637 24728796 ~ 24733159 (+) False LOC120565988
XM_039812165.1 mRNA upstream 51637 24728801 ~ 24733159 (+) True LOC120565988
XM_039812161.1 mRNA upstream 62698 24710527 ~ 24722098 (+) False si:ch211-221n20.8
XM_039810188.1 mRNA downstream 66945 24852287 ~ 24873916 (+) True elovl1b
XM_039810869.1 mRNA downstream 162258 24947600 ~ 24988333 (+) False slc44a5b
XM_039810871.1 mRNA downstream 162258 24947600 ~ 24988333 (+) False slc44a5b
XM_039810873.1 mRNA downstream 162259 24947601 ~ 24988333 (+) False slc44a5b
XM_039810868.1 mRNA downstream 162260 24947602 ~ 24988068 (+) True slc44a5b
TU132257 other upstream 915 24781918 ~ 24783881 (+) True G98012
TU131697 other upstream 1306978 23474782 ~ 23477818 (+) True G97596
TU131620 other upstream 1462887 23321522 ~ 23321909 (+) False pole4
XR_005640351.1 other upstream 2208594 22576129 ~ 22576202 (+) True LOC120566217
XR_005640354.1 other upstream 2209648 22575067 ~ 22575148 (+) True LOC120566220
TU132285 other downstream 66959 24852301 ~ 24873874 (+) False elovl1b
TU132286 other downstream 82675 24868017 ~ 24873874 (+) False elovl1b
TU132486 other downstream 747483 25532825 ~ 25547089 (+) True G98194
TU132604 other downstream 944916 25730258 ~ 25732177 (+) False slc35a3a
XR_005640198.1 other downstream 1206164 25991506 ~ 26019371 (+) False dot1l

Expression Profile