RNA id: XM_039811560.1


Basic Information

Item Value
RNA id XM_039811560.1
length 3159
RNA type mRNA
GC content 0.49
exon number 17
gene id mfn1b
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 20756787 ~ 20774813 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tagctagtggCACAATGTCAAACGTAGCATCTCGGATCAACTGGGTTTTTATTACGAATTAATAAGTCTGTTCCGGAAGCCTTTCTCCGTCTGCGACCAGCAGCTTGACATTTGTGCCATTACAGGATACAGAAGAAGACAGCCAGGCTGACAGCAAGTATCTTCCAGCGAGGCAAAGGATTGTCTGTCGCTGCGGATCAATATTGTTTGTGTTATGAGAAGAGGACACTGGCTGTGACACCTGTGGCAATAAAGCTCTGCAGAACATTGCCAGTCAGGATCAAAAGTTGGAGATCCAGTCGTATGCTGACAAACTTGCTGTCATTAAGGAGGTGCTGGCACGCAGACACATGAAAGTGGCCTTTTTTGGCAGgACCAGTAATGGTAAAAGCACAGTTGTCAACGCTATGCTGAGGGACCGTGTGCTGCCCAGCGGGATTGGCCACACCACTAACTGCTTCCTTAGTGTCGAGGGCACTGATGATGACAAGGCCTACCTCAAGACGGAGGGCTCTGATGAGGAAAAGAGCATCAAGACTGTAAACCAGCTGGCTCATGCACTCCACATGGATGAGAGTCTGGACGCCGGCTGTCTTGTCCGTGTGTTTTGGCCGAAGACCAGGTGTGCTCTGCTTCGAGACGACCTGGTGCTTGTAGACAGCCCGGGGACAGATGTCACATCACAACTGGACAGCTGGATTGACAAGTTTTGCCTGGATGCTGATGTCTTTGTGCTGGTGGCCAACTCTGAATCCACACTCATGAACACGGAAAAGCACTTTTTCCACAAAGTGAACGAACGTCTGTCAAAGCCCAACATCTTCATTCTCAACAACCGCTGGGACGCCTCAGCAAACGAACCAGAGTACATGGAGGATGTGAGGAAGCAGCACACAGACCGTTGTGTGAATTTCctggtggaggagctgaaggTTGTGGACCGTGATCAGGCACCCAACCGCATTTTCTTTGTCTCTGCCAAAGAGGTGCTCAACTCACGCATGCAACGTGCACAGGGCATGCCTGAAACAGGTGGAGCTCTGGCTGAGGGCTTCCAGGAGAGACTGAAGGAGTTCCAATGCTTTGAGAGGAggtttgagGAGTGTATCTCGCAGTCAGCAGTGAAAACAAAGTTTGAGCAGCACACTATCAGGGCCAAGCAGATCACAGAAAAAGTCCAGAGCATCATGGACGCCATCAACATCGAGGCGGCGGAGAAGAGAGTGGCGGCACTGGAGGACAGAGAGTACCAGATAGACCGGCTGGAGTTTGTCAAGAATCAGCTGAACCTGCTGATTGATGATATCAAGAAAAAGATCAAGGCCATCAGTGAGGACGTGGAGTCTAAGGTGTCCAGTGCCATGGGAGAGGAGATCTGTCGTCTCAACGTAATCGTCGATGAGTTCCACGCTGACTTCCACCCGTCGCCACATGTCCTCAAGATCTACAAATCTGAGCTGCTGGCTCACGTGGAGGAGGGGATGGGTAAGAATCTGGCCTTCCGCTGCTCCAACGCCATCAACGCTTCTGTCCAGTCGTCTCAGAGTTACATGATGGAGAGCATGCTCCCTCTGCTTCCCTCTACGGCCCAGAGCCAAGTCCACATGCTGGTGCCCAGCAGGAAGTTTGACCTGAGTTACGACCTGAACTGCACCACACTTTGCAGTGACTTCCAGGAGAACATTGAGTTTAACTTTTCGTTGGGCTGGACAGCGTTAGTCCACCGCTTCCTGGGATCTGTCAACGCACAGAAAGCGCTCCGACTGGTGGACCAGAACTTCCAGGCCTCTCGGCCAGCGCTGGCCCTTACGCCCTCCTCAGGACCCCCCTCCACGATAGCCCCGCCCAACAACGAGACAGCCCTCATGAGCCAAGAGGACTTGATGGTAGCCATGGCAACCAACGTGGCATCCCTCACCTCCCGTACTTCAATGAGCGTTATAATCGTTGGGGGAGTGgTGTGGAGAACAGTTGGCTGGAGGCTGATCGGCCTGTCTGCCTCACTGTACGGCTTGTTGTACCTGTACGAGAGACTCACCTGGACCACGAAGGCAAAGGAGCGCACTCTGAAGCGCCAGTTTGTGGACTACGCAAGTGAGAAGCTGCAGCTCATCGTCAGCTTTACTAGCGCAAACTGTAGCCACCAGGTCCAACAGGAGATGGCGGCAACCTTTGCCCGGCTCTGTCAGCAGGTGGACCAGACGCAAAAAGAGCTTGAGGCTGAAATCCGCCAACTGACAGCCAAGATAGATCAGCTGGAGACCGTTCAGAAACACTCCAAGAGCCTGCGACATAAAGCGACAGAACTGGAGAAACAGTTGGAGGAGTTCACAAACCAGTACCTGCAGCCTCAGCAGTGAGCTGCTCTTCTTCATCGCGCCGCAGTTTGGATCTTGTTGAGCCAATCATTCCTCAGCCAGGTGCCGCCTCATGGCGCCTGGGCCTCAACCCCCTAAACTACATCAGTTTCTGTGGACAGTAGTGCAGAACAGAGAGATCAATTCATCGATTGGTCTATCATCTGAAAAGAAATCTAAagatattttgataatcaacgAAAGGTTATCAGGCAACAATACCAAACTTCTGCAGCTTCTCAAGCGTAAAGATTCGGTCGTTTTGTGTCATTTGTAAAAATGTAGttatttttgggttttttttgtcacacaaaATAGTCGATTTCTAGAAAGTTTTTGGTAACTCAATGACCACTTGTCTTTTTCTTGACTTGTCaactaatcaagaaaaaaagattaattgataatgaaaataatctgaATTTTCACTCTTAGTGGACAGAGGAGATTGAAGGTCCAGACACGACAGTAttttcccctcctcctctcctccagtggTGCTTGAGAACCCGCAGTGAACAAACTGTAAAACAGAAACTGCGtgtaaaacaaagaaacatGGATTTAATATGTGCAAAGACACTCTACAAGGTGGCGATAGAATCTCGGTCGTTGGGAAGGCTACCGGTCGGGTGCTACATTTTGACACTAACGTGCTTCTAACTGTGAATATGCCTTTTTTGACTAACTTTTGTGGATCAAATGAAGTTTGAGTTTCTGTAAGattgtacatgtacagtatctgtTCGGGCACATGATCTGCTGTATGTtagcaacaaaaaataaatatatttaataataa

Function

GO:

id name namespace
GO:0006184 obsolete GTP catabolic process biological_process
GO:0008053 mitochondrial fusion biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005741 mitochondrial outer membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU130579 lncRNA upstream 6892 20749212 ~ 20749896 (+) True G96777
TU130574 lncRNA upstream 13013 20743067 ~ 20743775 (+) True G96775
TU130551 lncRNA upstream 54850 20701439 ~ 20701938 (+) True G96758
TU130545 lncRNA upstream 80051 20674257 ~ 20676737 (+) True G96754
TU130585 lncRNA downstream 1745 20776558 ~ 20780918 (+) True G96782
TU130716 lncRNA downstream 230918 21005731 ~ 21009310 (+) True G96871
TU130756 lncRNA downstream 286859 21061672 ~ 21062304 (+) True G96898
TU130765 lncRNA downstream 352250 21127063 ~ 21174307 (+) False G96906
TU130764 lncRNA downstream 396453 21171266 ~ 21174307 (+) True G96906
XM_039810649.1 mRNA upstream 85637 20669336 ~ 20671151 (+) True LOC120565171
XM_039810645.1 mRNA upstream 94090 20652948 ~ 20662698 (+) True LOC120565169
XM_039811657.1 mRNA upstream 126451 20620595 ~ 20630337 (+) True vtg2
XM_039811109.1 mRNA upstream 151451 20598582 ~ 20605337 (+) True spata1
XM_039811116.1 mRNA upstream 161349 20588300 ~ 20595439 (+) True rpf1
XM_039811544.1 mRNA downstream 35370 20810183 ~ 20816886 (+) True actl6a
XM_039812465.1 mRNA downstream 45435 20820248 ~ 20824575 (+) True ndufb5
XM_039812461.1 mRNA downstream 50707 20825520 ~ 20867988 (+) True usp13
XM_039811188.1 mRNA downstream 261464 21036277 ~ 21060839 (+) True ccdc50a
XM_039811189.1 mRNA downstream 261464 21036277 ~ 21060839 (+) False ccdc50a
TU130185 other upstream 1225111 19530767 ~ 19531677 (+) True G96513
TU130059 other upstream 1971152 18782600 ~ 18785636 (+) True G96418
XR_005640349.1 other upstream 2884377 17872278 ~ 17872411 (+) True LOC120566214
XR_005640363.1 other upstream 2884941 17871710 ~ 17871847 (+) True LOC120566229
XR_005640362.1 other upstream 2887986 17868666 ~ 17868802 (+) True LOC120566228
TU131036 other downstream 916084 21690897 ~ 21782000 (+) True G97093
TU131315 other downstream 1508833 22283646 ~ 22287272 (+) True G97321
XR_005640282.1 other downstream 1710698 22485511 ~ 22488103 (+) False LOC120565764
XR_005640308.1 other downstream 1718144 22492957 ~ 22501015 (+) False soat1
XR_005640352.1 other downstream 1797246 22572059 ~ 22572139 (+) False LOC120566218

Expression Profile