RNA id: XM_039823151.1



Basic Information


Item Value
RNA id XM_039823151.1
length 422
RNA type mRNA
GC content 0.64
exon number 4
gene id LOC120573427
representative True

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 39114445 ~ 39124082 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ATCCCTCGGCGCCTCCGGTGACCTCCTCCTCGGCGGTGACGCCGGACGCCGTTCCTCCCAAACCAAAGAAGCCGCGGGGCCTGGAGctgccctcctccccctccctcccccccggCCTCTCCCTGGATAAGGTGAATGCAGCTGTTAACAGTTTATTGGCTCCTGGTTCAGCGACCAACTCGCTCACCCAGACTGTCATCACCTCCCATGCTCTGACTCCGTCCTGCTGACTCCGAAGTCCTCTTCCCTCCACCATCCACTTCTGGAGCACGCTGAGTCCCATCGCGCCTCGCTCCCCGGCCAAACTCTCCTTCCAGTTTCCCACAAACGGCAGTAACCAGATCCACATCCCGGCTCTGAGCGTGGACGGCCTCTCCACCCCAGTGGTTCTCTCCCCGGCCCCCAGAAACCCTGAGCCCCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU203321 lncRNA downstream 12090 39100701 ~ 39102355 (-) True G150262
TU203231 lncRNA downstream 49723 38703226 ~ 39064722 (-) True G150191
TU203311 lncRNA downstream 155923 38952654 ~ 38958522 (-) True G150253
TU203307 lncRNA downstream 178413 38935387 ~ 38936032 (-) True G150251
TU203281 lncRNA downstream 207367 38858589 ~ 38907078 (-) True G150231
XM_039823584.1 mRNA downstream 199516 38904852 ~ 38914929 (-) True wdr55
XM_039821591.1 mRNA downstream 214559 38888895 ~ 38899886 (-) True LOC120572319
XM_039821975.1 mRNA downstream 225274 38882238 ~ 38889171 (-) True LOC120572656
XM_039821590.1 mRNA downstream 247663 38828560 ~ 38866782 (-) True LOC120572318
XM_039821589.1 mRNA downstream 297763 38793562 ~ 38816682 (-) True cfi
TU203233 other downstream 424852 38611655 ~ 38689593 (-) True G150192
TU203245 other downstream 446474 38644566 ~ 38667971 (-) True lratb.1
TU203220 other downstream 478852 38627757 ~ 38635593 (-) True LOC120572655
TU203219 other downstream 481393 38561269 ~ 38633052 (-) False LOC120572655
TU203204 other downstream 573275 38487968 ~ 38541170 (-) False LOC120572653

Expression Profile