RNA id: unassigned_transcript_735


Basic Information

Item Value
RNA id unassigned_transcript_735
length 374
RNA type V_gene_segment
GC content 0.48
exon number 3
gene id LOC120574342
representative False

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9123577 ~ 9173311 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ATGActctgctgctgctgttggcagCTGGATgtgtgaagtgtgaacagttgacccagccagcctctgtgactgtgcagccaggtcaacgtctgaccatcacctgtcaggtctcttattctctcagcagctactacacagcttggatcagacagcctgcagggaaaggactggagtggattggATGGAAATATACTGGAGGTTCACACTACAAAGATtcactgaagaacaagttcagtatTGACTTAGAGACTTCCAGCAAGACAGTGACTCTAAATGGACAGAATGTGCAGCCTGAAGACactgctgtgtattactgtgccagagagccacagtaacacaaaccatcagtagacctgaacaaaaacccctcaga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU207634 lncRNA upstream 32620 9139466 ~ 9139797 (+) True G153261
TU207625 lncRNA upstream 51659 9120458 ~ 9120758 (+) True G153254
TU207597 lncRNA upstream 126256 9043517 ~ 9046161 (+) True G153239
TU207379 lncRNA upstream 130545 9039691 ~ 9041872 (+) False asphd1
TU207366 lncRNA upstream 158170 9011238 ~ 9014247 (+) True G153088
TU207671 lncRNA downstream 15127 9188438 ~ 9242716 (+) True G153291
TU207690 lncRNA downstream 144045 9317356 ~ 9400297 (+) True G153306
TU207684 lncRNA downstream 169334 9342645 ~ 9439312 (+) False G153301
TU207685 lncRNA downstream 218262 9391573 ~ 9439312 (+) True G153301
TU207713 lncRNA downstream 256464 9429775 ~ 9454183 (+) True G153322
XM_039825618.1 mRNA upstream 130372 9036901 ~ 9042045 (+) True asphd1
XM_039823792.1 mRNA upstream 203372 8959248 ~ 8969045 (+) False eps8l1a
XM_039824667.1 mRNA downstream 705991 9879302 ~ 9887967 (+) True LOC120574409
XM_039824673.1 mRNA downstream 765652 9938963 ~ 9939633 (+) True LOC120574415
XM_039824991.1 mRNA downstream 767212 9940523 ~ 10027725 (+) False LOC120574577
XM_039824992.1 mRNA downstream 767578 9940889 ~ 10027725 (+) False LOC120574577
XM_039824993.1 mRNA downstream 819478 9992789 ~ 10027725 (+) False LOC120574577
unassigned_transcript_734 other upstream 504 9171332 ~ 9171913 (+) True LOC120574341
unassigned_transcript_733 other upstream 15597 9153736 ~ 9156820 (+) True LOC120574340
unassigned_transcript_732 other upstream 23693 9148184 ~ 9148724 (+) True LOC120574643
unassigned_transcript_731 other upstream 28997 9142990 ~ 9143420 (+) True LOC120574618
unassigned_transcript_730 other upstream 31425 9140322 ~ 9140992 (+) True LOC120574339
unassigned_transcript_736 other downstream 11168 9184479 ~ 9185326 (+) True LOC120574631
unassigned_transcript_822 other downstream 577307 9750618 ~ 9751056 (+) True LOC120574616
unassigned_transcript_823 other downstream 578628 9751939 ~ 9752601 (+) True LOC120574628
TU207814 other downstream 578737 9752048 ~ 9752558 (+) False LOC120574628
unassigned_transcript_824 other downstream 580406 9753717 ~ 9754263 (+) True LOC120574396

Expression Profile