RNA id: TU207671


Basic Information

Item Value
RNA id TU207671
length 517
lncRNA type inter_gene
GC content 0.36
exon number 2
gene id G153291
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9188438 ~ 9242716 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tattttaacatcgGTTTAATGATGGTTTAATATTCTACAAGATATTCTTACATTTTGTGACGACTCTTCCACTCCAAGTGAAATGGCTGAAATTGTGAACCTTGGGTCTAGCTGAAGTTATTTCTTGTTGAGAAGACCTTGGTCTCTCATACTGTTTATTTTAAGCAGAAATAGTGAAGAAGGCCATAACACTGTCAGAACAGCGTctccttctgtctcctgagataaaactgttgtttaggctaatgaaaagaacaggagcagaggggaaggtgatcgactatggccatgctagaagatacatttagaggggtggcttaacggaggttttcactatatgatgtgtggatgtttagactttaggttagaaagactTTTTCAGACGTGCTGCGTATACCTGTGAAACTGAATTTctctatttgcaaatataataaatactcaaagaccaaactttggtttaattctcaaacagtctttcATTCGTTTCATCTCGTATCATTGATATTTATCaaaaaac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU207634 lncRNA upstream 48641 9139466 ~ 9139797 (+) True G153261
TU207625 lncRNA upstream 67680 9120458 ~ 9120758 (+) True G153254
TU207597 lncRNA upstream 142277 9043517 ~ 9046161 (+) True G153239
TU207379 lncRNA upstream 146566 9039691 ~ 9041872 (+) False asphd1
TU207366 lncRNA upstream 174191 9011238 ~ 9014247 (+) True G153088
TU207690 lncRNA downstream 74640 9317356 ~ 9400297 (+) True G153306
TU207684 lncRNA downstream 99929 9342645 ~ 9439312 (+) False G153301
TU207685 lncRNA downstream 148857 9391573 ~ 9439312 (+) True G153301
TU207713 lncRNA downstream 187059 9429775 ~ 9454183 (+) True G153322
TU207734 lncRNA downstream 273297 9516013 ~ 9517740 (+) True G153338
XM_039825618.1 mRNA upstream 146393 9036901 ~ 9042045 (+) True asphd1
XM_039823792.1 mRNA upstream 219393 8959248 ~ 8969045 (+) False eps8l1a
XM_039824667.1 mRNA downstream 636586 9879302 ~ 9887967 (+) True LOC120574409
XM_039824673.1 mRNA downstream 696247 9938963 ~ 9939633 (+) True LOC120574415
XM_039824991.1 mRNA downstream 697807 9940523 ~ 10027725 (+) False LOC120574577
XM_039824992.1 mRNA downstream 698173 9940889 ~ 10027725 (+) False LOC120574577
XM_039824993.1 mRNA downstream 750073 9992789 ~ 10027725 (+) False LOC120574577
unassigned_transcript_736 other upstream 3112 9184479 ~ 9185326 (+) True LOC120574631
unassigned_transcript_735 other upstream 15127 9172417 ~ 9173311 (+) False LOC120574342
TU207630 other upstream 15176 9123577 ~ 9173262 (+) True LOC120574342
unassigned_transcript_734 other upstream 16525 9171332 ~ 9171913 (+) True LOC120574341
unassigned_transcript_733 other upstream 31618 9153736 ~ 9156820 (+) True LOC120574340
unassigned_transcript_822 other downstream 507902 9750618 ~ 9751056 (+) True LOC120574616
unassigned_transcript_823 other downstream 509223 9751939 ~ 9752601 (+) True LOC120574628
TU207814 other downstream 509332 9752048 ~ 9752558 (+) False LOC120574628
unassigned_transcript_824 other downstream 511001 9753717 ~ 9754263 (+) True LOC120574396
unassigned_transcript_825 other downstream 513773 9756489 ~ 9756908 (+) True LOC120574655

Expression Profile