RNA id: TU207685


Basic Information

Item Value
RNA id TU207685
length 309
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G153301
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9342645 ~ 9439312 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TCTCTCGTGCACAGTAATACACTGCCGTGTCCTcggtcttcagactgttcatctgcagatagaGTTTACTGCTGGAGTCATCTCTGGAGATGGTGAATCTCCCCTGGACTGACTGGGAGTAAGAGATAGGAGTACTAGATGTGTCTATATATGCgatccactccagtccttttccaggagcctgtctgacCCAGCTCATAGCGTAGCTGCTGAATGTGaatccagatgttgtacaggtcaatctgtgggattctccaggtcttttaatcgctggttcagattctgtcagagtctgaccatcaacacctg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU207671 lncRNA upstream 148857 9188438 ~ 9242716 (+) True G153291
TU207634 lncRNA upstream 251776 9139466 ~ 9139797 (+) True G153261
TU207625 lncRNA upstream 270815 9120458 ~ 9120758 (+) True G153254
TU207597 lncRNA upstream 345412 9043517 ~ 9046161 (+) True G153239
TU207379 lncRNA upstream 349701 9039691 ~ 9041872 (+) False asphd1
TU207734 lncRNA downstream 76701 9516013 ~ 9517740 (+) True G153338
TU207745 lncRNA downstream 102867 9542179 ~ 9542934 (+) True G153345
TU207740 lncRNA downstream 197517 9636829 ~ 9637969 (+) True G153341
TU207761 lncRNA downstream 215011 9654323 ~ 9678077 (+) True G153359
TU207736 lncRNA downstream 219036 9658348 ~ 9687829 (+) True G153340
XM_039825618.1 mRNA upstream 349528 9036901 ~ 9042045 (+) True asphd1
XM_039823792.1 mRNA upstream 422528 8959248 ~ 8969045 (+) False eps8l1a
XM_039824667.1 mRNA downstream 439990 9879302 ~ 9887967 (+) True LOC120574409
XM_039824673.1 mRNA downstream 499651 9938963 ~ 9939633 (+) True LOC120574415
XM_039824991.1 mRNA downstream 501211 9940523 ~ 10027725 (+) False LOC120574577
XM_039824992.1 mRNA downstream 501577 9940889 ~ 10027725 (+) False LOC120574577
XM_039824993.1 mRNA downstream 553477 9992789 ~ 10027725 (+) False LOC120574577
unassigned_transcript_736 other upstream 206247 9184479 ~ 9185326 (+) True LOC120574631
unassigned_transcript_735 other upstream 218262 9172417 ~ 9173311 (+) False LOC120574342
unassigned_transcript_734 other upstream 219660 9171332 ~ 9171913 (+) True LOC120574341
unassigned_transcript_733 other upstream 234753 9153736 ~ 9156820 (+) True LOC120574340
unassigned_transcript_732 other upstream 242849 9148184 ~ 9148724 (+) True LOC120574643
unassigned_transcript_822 other downstream 311306 9750618 ~ 9751056 (+) True LOC120574616
unassigned_transcript_823 other downstream 312627 9751939 ~ 9752601 (+) True LOC120574628
TU207814 other downstream 312736 9752048 ~ 9752558 (+) False LOC120574628
unassigned_transcript_824 other downstream 314405 9753717 ~ 9754263 (+) True LOC120574396
unassigned_transcript_825 other downstream 317177 9756489 ~ 9756908 (+) True LOC120574655

Expression Profile