RNA id: TU207713


Basic Information

Item Value
RNA id TU207713
length 353
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G153322
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9429775 ~ 9454183 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTACTGTAggattttgtacagctgctcaaccaactccagtcactgtggctctcgagcacaataataaacagcagaatcttcagtcttcagactgttcatctgcagatacagctgctctctgctgttgtctctggagaTGGTAAACCGGCCTTGGACTGACTGAGAGTAGCGGATGTTATTACTGTCATAGCTACTCGCaacccactccagtccttttccaggagcctgtctgatccaGGCCATCCAGTAGCTACTGAATGACaatccagatgttgtacaggtcaatctgtgggattctccaggtcttttaaccgctggttcagattctgtcagagtctgaccatcaacacctg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU207690 lncRNA upstream 29478 9317356 ~ 9400297 (+) True G153306
TU207671 lncRNA upstream 187059 9188438 ~ 9242716 (+) True G153291
TU207634 lncRNA upstream 289978 9139466 ~ 9139797 (+) True G153261
TU207625 lncRNA upstream 309017 9120458 ~ 9120758 (+) True G153254
TU207597 lncRNA upstream 383614 9043517 ~ 9046161 (+) True G153239
TU207734 lncRNA downstream 61830 9516013 ~ 9517740 (+) True G153338
TU207745 lncRNA downstream 87996 9542179 ~ 9542934 (+) True G153345
TU207740 lncRNA downstream 182646 9636829 ~ 9637969 (+) True G153341
TU207761 lncRNA downstream 200140 9654323 ~ 9678077 (+) True G153359
TU207736 lncRNA downstream 204165 9658348 ~ 9687829 (+) True G153340
XM_039825618.1 mRNA upstream 387730 9036901 ~ 9042045 (+) True asphd1
XM_039823792.1 mRNA upstream 460730 8959248 ~ 8969045 (+) False eps8l1a
XM_039824667.1 mRNA downstream 425119 9879302 ~ 9887967 (+) True LOC120574409
XM_039824673.1 mRNA downstream 484780 9938963 ~ 9939633 (+) True LOC120574415
XM_039824991.1 mRNA downstream 486340 9940523 ~ 10027725 (+) False LOC120574577
XM_039824992.1 mRNA downstream 486706 9940889 ~ 10027725 (+) False LOC120574577
XM_039824993.1 mRNA downstream 538606 9992789 ~ 10027725 (+) False LOC120574577
unassigned_transcript_736 other upstream 244449 9184479 ~ 9185326 (+) True LOC120574631
unassigned_transcript_735 other upstream 256464 9172417 ~ 9173311 (+) False LOC120574342
unassigned_transcript_734 other upstream 257862 9171332 ~ 9171913 (+) True LOC120574341
unassigned_transcript_733 other upstream 272955 9153736 ~ 9156820 (+) True LOC120574340
unassigned_transcript_732 other upstream 281051 9148184 ~ 9148724 (+) True LOC120574643
unassigned_transcript_822 other downstream 296435 9750618 ~ 9751056 (+) True LOC120574616
unassigned_transcript_823 other downstream 297756 9751939 ~ 9752601 (+) True LOC120574628
TU207814 other downstream 297865 9752048 ~ 9752558 (+) False LOC120574628
unassigned_transcript_824 other downstream 299534 9753717 ~ 9754263 (+) True LOC120574396
unassigned_transcript_825 other downstream 302306 9756489 ~ 9756908 (+) True LOC120574655

Expression Profile