RNA id: TU207737



Basic Information


Item Value
RNA id TU207737
length 286
lncRNA type inter_gene
GC content 0.48
exon number 3
gene id G153340
representative False

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9658348 ~ 9715062 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TCTCTTCTTGCACAGTAATACACTGCTGTGTCCTcggtcttcagactgttcatctgcagatagaGTTTACTGCTGGAGTCATCTCTGGAGATGGTGAATCTCCCCTGGACTGACTGGGAGTAATAGATGGGAGAACTGCCTGTGTATATAAAAGCgatccactccagtccttttccaggagcctgtctgacccagttcaTAGGGTAGCTGCTGAATGTGaatccagatgttgtacaggtcaatctgtgggattctccagGCCTTTTAATCGCTGGTTCAGATTCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU207740 lncRNA upstream 35529 9636829 ~ 9637969 (+) True G153341
TU207745 lncRNA upstream 130564 9542179 ~ 9542934 (+) True G153345
TU207734 lncRNA upstream 155758 9516013 ~ 9517740 (+) True G153338
TU207713 lncRNA upstream 219315 9429775 ~ 9454183 (+) True G153322
TU207685 lncRNA upstream 234186 9391573 ~ 9439312 (+) True G153301
XR_005641881.1 lncRNA downstream 147923 9862985 ~ 9864890 (+) True LOC120574665
TU207833 lncRNA downstream 157259 9872321 ~ 9878863 (+) True G153415
TU207847 lncRNA downstream 206490 9921552 ~ 9935038 (+) True G153423
TU207848 lncRNA downstream 211076 9926138 ~ 9926485 (+) True G153424
XR_005641879.1 lncRNA downstream 232509 9947571 ~ 9950872 (+) False LOC120574664
XM_039825618.1 mRNA upstream 631453 9036901 ~ 9042045 (+) True asphd1
XM_039823792.1 mRNA upstream 704453 8959248 ~ 8969045 (+) False eps8l1a
XM_039824667.1 mRNA downstream 164240 9879302 ~ 9887967 (+) True LOC120574409
XM_039824673.1 mRNA downstream 223901 9938963 ~ 9939633 (+) True LOC120574415
XM_039824991.1 mRNA downstream 225461 9940523 ~ 10027725 (+) False LOC120574577
XM_039824992.1 mRNA downstream 225827 9940889 ~ 10027725 (+) False LOC120574577
XM_039824993.1 mRNA downstream 277727 9992789 ~ 10027725 (+) False LOC120574577
unassigned_transcript_736 other upstream 488172 9184479 ~ 9185326 (+) True LOC120574631
unassigned_transcript_735 other upstream 500187 9172417 ~ 9173311 (+) False LOC120574342
unassigned_transcript_734 other upstream 501585 9171332 ~ 9171913 (+) True LOC120574341
unassigned_transcript_733 other upstream 516678 9153736 ~ 9156820 (+) True LOC120574340
unassigned_transcript_732 other upstream 524774 9148184 ~ 9148724 (+) True LOC120574643
unassigned_transcript_822 other downstream 35556 9750618 ~ 9751056 (+) True LOC120574616
unassigned_transcript_823 other downstream 36877 9751939 ~ 9752601 (+) True LOC120574628
TU207814 other downstream 36986 9752048 ~ 9752558 (+) False LOC120574628
unassigned_transcript_824 other downstream 38655 9753717 ~ 9754263 (+) True LOC120574396
unassigned_transcript_825 other downstream 41427 9756489 ~ 9756908 (+) True LOC120574655

Expression Profile