RNA id: TU207761



Basic Information


Item Value
RNA id TU207761
length 270
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G153359
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9654323 ~ 9678077 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TGGCTTTAAGTTGGACAGTCTCAGATACACCATGCTGTTGCTGTTATCTCTGGTGACCTCTACTCGTCCTTGCACACTGCTGGCATAATCTGTTCTACTAGCATCGCTGTAAATACGCCCTATCCATTCCAGTGCTTCTCCTGCAGGTTGTCTGATCCAGTGCATGCTGCAGCAGCTAAATGTGAAGCCAGATCCCCTGCAGGAGAGACTGAGAGTCTCCCCAGACATTTTCACTACTGAACTGGAAGGAATGGACTCCATACTCTGACC

Function


GO: NA

KEGG:

id description
ko04145 Phagosome
ko05140 Leishmaniasis

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU207740 lncRNA upstream 16354 9636829 ~ 9637969 (+) True G153341
TU207745 lncRNA upstream 111389 9542179 ~ 9542934 (+) True G153345
TU207734 lncRNA upstream 136583 9516013 ~ 9517740 (+) True G153338
TU207713 lncRNA upstream 200140 9429775 ~ 9454183 (+) True G153322
TU207684 lncRNA upstream 215011 9342645 ~ 9439312 (+) False G153301
XR_005641881.1 lncRNA downstream 184908 9862985 ~ 9864890 (+) True LOC120574665
TU207833 lncRNA downstream 194244 9872321 ~ 9878863 (+) True G153415
TU207847 lncRNA downstream 243475 9921552 ~ 9935038 (+) True G153423
TU207848 lncRNA downstream 248061 9926138 ~ 9926485 (+) True G153424
XR_005641879.1 lncRNA downstream 269494 9947571 ~ 9950872 (+) False LOC120574664
XM_039825618.1 mRNA upstream 612278 9036901 ~ 9042045 (+) True asphd1
XM_039823792.1 mRNA upstream 685278 8959248 ~ 8969045 (+) False eps8l1a
XM_039824667.1 mRNA downstream 201225 9879302 ~ 9887967 (+) True LOC120574409
XM_039824673.1 mRNA downstream 260886 9938963 ~ 9939633 (+) True LOC120574415
XM_039824991.1 mRNA downstream 262446 9940523 ~ 10027725 (+) False LOC120574577
XM_039824992.1 mRNA downstream 262812 9940889 ~ 10027725 (+) False LOC120574577
XM_039824993.1 mRNA downstream 314712 9992789 ~ 10027725 (+) False LOC120574577
unassigned_transcript_736 other upstream 468997 9184479 ~ 9185326 (+) True LOC120574631
unassigned_transcript_735 other upstream 481012 9172417 ~ 9173311 (+) False LOC120574342
unassigned_transcript_734 other upstream 482410 9171332 ~ 9171913 (+) True LOC120574341
unassigned_transcript_733 other upstream 497503 9153736 ~ 9156820 (+) True LOC120574340
unassigned_transcript_732 other upstream 505599 9148184 ~ 9148724 (+) True LOC120574643
unassigned_transcript_822 other downstream 72541 9750618 ~ 9751056 (+) True LOC120574616
unassigned_transcript_823 other downstream 73862 9751939 ~ 9752601 (+) True LOC120574628
TU207814 other downstream 73971 9752048 ~ 9752558 (+) False LOC120574628
unassigned_transcript_824 other downstream 75640 9753717 ~ 9754263 (+) True LOC120574396
unassigned_transcript_825 other downstream 78412 9756489 ~ 9756908 (+) True LOC120574655

Expression Profile