RNA id: TU207802


Basic Information

Item Value
RNA id TU207802
length 474
RNA type TUCP
GC content 0.45
exon number 2
gene id G153385
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9789206 ~ 9789772 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AGTCAATGCAAATCTCTGACCTCTTCCATCTCTACATATGTGTTGCAGAGTGAAGGACAGACACTAAATCACTGACATACACACTGTAGACTGGACAGAGACAACTGGCTTTAACAATGATCAGACCTGATTATTTGGTTGTTTTTCTCATCCTGTCATTTAACTGGTCAGGTACTGAGGGTCAAACACTGACTGAGTCTGAACCAGTggttaaaagacctggagaatcccacagaCTGACCTGCACATATTCTGGGTTTGGTGGGGATTATACTAATGCTTGGATCAGACAGGCTGctggaaaaggactggaatGGATCGCTCGCATCAGCAGTGCTAGTAGCAACATCTACTACTCTCAGTCAGTTCAAGGCCGGTTTACCATCTCCAGAGAAAACAGCAGACAGCAggtgtatctgcagatgaatagtctgaagactgaagattctgctgtttattattgtgctcgagaCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU207737 lncRNA upstream 74144 9673498 ~ 9715062 (+) False G153340
TU207736 lncRNA upstream 101377 9658348 ~ 9687829 (+) True G153340
TU207761 lncRNA upstream 111129 9654323 ~ 9678077 (+) True G153359
TU207740 lncRNA upstream 151237 9636829 ~ 9637969 (+) True G153341
TU207745 lncRNA upstream 246272 9542179 ~ 9542934 (+) True G153345
XR_005641881.1 lncRNA downstream 73213 9862985 ~ 9864890 (+) True LOC120574665
TU207833 lncRNA downstream 82549 9872321 ~ 9878863 (+) True G153415
TU207847 lncRNA downstream 131780 9921552 ~ 9935038 (+) True G153423
TU207848 lncRNA downstream 136366 9926138 ~ 9926485 (+) True G153424
XR_005641879.1 lncRNA downstream 157799 9947571 ~ 9950872 (+) False LOC120574664
XM_039825618.1 mRNA upstream 747161 9036901 ~ 9042045 (+) True asphd1
XM_039823792.1 mRNA upstream 820161 8959248 ~ 8969045 (+) False eps8l1a
XM_039824667.1 mRNA downstream 89530 9879302 ~ 9887967 (+) True LOC120574409
XM_039824673.1 mRNA downstream 149191 9938963 ~ 9939633 (+) True LOC120574415
XM_039824991.1 mRNA downstream 150751 9940523 ~ 10027725 (+) False LOC120574577
XM_039824992.1 mRNA downstream 151117 9940889 ~ 10027725 (+) False LOC120574577
XM_039824993.1 mRNA downstream 203017 9992789 ~ 10027725 (+) False LOC120574577
TU207818 other upstream 6641 9766470 ~ 9782565 (+) True G153401
unassigned_transcript_826 other upstream 18072 9758667 ~ 9771134 (+) True LOC120574397
TU207803 other upstream 18081 9770635 ~ 9771125 (+) False LOC120574397
TU207826 other upstream 19955 9768638 ~ 9769251 (+) True G153409
TU207825 other upstream 23382 9765329 ~ 9765824 (+) True G153408
TU207810 other downstream 717 9790489 ~ 9790934 (+) True G153393
TU207813 other downstream 10960 9800732 ~ 9840628 (+) True LOC120574632
TU207831 other downstream 45784 9835556 ~ 9836070 (+) False LOC120574404
unassigned_transcript_829 other downstream 45790 9835562 ~ 9836139 (+) True LOC120574404
unassigned_transcript_830 other downstream 48434 9838206 ~ 9838655 (+) True LOC120574405

Expression Profile