RNA id: TU207811



Basic Information


Item Value
RNA id TU207811
length 345
RNA type TUCP
GC content 0.47
exon number 3
gene id G153394
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9783832 ~ 9909154 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AGcttcaacatcaacatgttctctgtagctctgatactgctgctggctgctggatCCTgtgtgaagtgtgaacagtTGACCCAGCCAGCCTCTGTGACTGTGCAGCCAGGTCAACGTCTGACCATCACCTGTCAGGTCTCTTATTCTCTTGGctactacacagcttggatcagacagcctgcagggaaaggactggagtggattggAATGAAATATACTGGAGCTTCATACTACAAAGATtcactgaagaacaagttcagtatTGACTTAGAGACTTCCAGCAAGACAGTGACTCTAAATGGACAGAATGTGCAGCCTGAAGACactgctgtgtattactgtgcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU207737 lncRNA upstream 68770 9673498 ~ 9715062 (+) False G153340
TU207736 lncRNA upstream 96003 9658348 ~ 9687829 (+) True G153340
TU207761 lncRNA upstream 105755 9654323 ~ 9678077 (+) True G153359
TU207740 lncRNA upstream 145863 9636829 ~ 9637969 (+) True G153341
TU207745 lncRNA upstream 240898 9542179 ~ 9542934 (+) True G153345
TU207847 lncRNA downstream 12398 9921552 ~ 9935038 (+) True G153423
TU207848 lncRNA downstream 16984 9926138 ~ 9926485 (+) True G153424
XR_005641879.1 lncRNA downstream 38417 9947571 ~ 9950872 (+) False LOC120574664
XR_005641880.1 lncRNA downstream 39453 9948607 ~ 9950872 (+) False LOC120574664
TU207800 lncRNA downstream 41454 9950608 ~ 9953355 (+) True LOC120574664
XM_039825618.1 mRNA upstream 741787 9036901 ~ 9042045 (+) True asphd1
XM_039823792.1 mRNA upstream 814787 8959248 ~ 8969045 (+) False eps8l1a
XM_039824673.1 mRNA downstream 29809 9938963 ~ 9939633 (+) True LOC120574415
XM_039824991.1 mRNA downstream 31369 9940523 ~ 10027725 (+) False LOC120574577
XM_039824992.1 mRNA downstream 31735 9940889 ~ 10027725 (+) False LOC120574577
XM_039824993.1 mRNA downstream 83635 9992789 ~ 10027725 (+) False LOC120574577
XM_039824995.1 mRNA downstream 102193 10011347 ~ 10027725 (+) False LOC120574577
TU207818 other upstream 1267 9766470 ~ 9782565 (+) True G153401
unassigned_transcript_826 other upstream 12698 9758667 ~ 9771134 (+) True LOC120574397
TU207803 other upstream 12707 9770635 ~ 9771125 (+) False LOC120574397
TU207826 other upstream 14581 9768638 ~ 9769251 (+) True G153409
TU207825 other upstream 18008 9765329 ~ 9765824 (+) True G153408
TU207815 other downstream 10381 9919535 ~ 9920004 (+) True G153398
unassigned_transcript_842 other downstream 11177 9920331 ~ 9920812 (+) True LOC120574623
unassigned_transcript_843 other downstream 21998 9931152 ~ 9934195 (+) True LOC120574413
unassigned_transcript_844 other downstream 26517 9935671 ~ 9936281 (+) True LOC120574414
unassigned_transcript_845 other downstream 28865 9938019 ~ 9938604 (+) True LOC120574658

Expression Profile