RNA id: XR_005641824.1


Basic Information

Item Value
RNA id XR_005641824.1
length 861
RNA type transcript
GC content 0.49
exon number 6
gene id tmem205
representative False

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 538953 ~ 547494 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CTTGTTCCTAGAGTAATATGACGGAGGAAGTGGAAGTGGCTCGGCTGGACCTTGGTCTACTAGTGTTTTTAGCAGTAGGAGTTAGATCAGTTTGCATTTGGCCTTCCTAAATCCGGAcagggaaaggaaaggaagACTTGATTATCAGGTCTGCTGCACGTGGAGCTCCAGCTGACAAACGCACCAGAGCTTTATCTCTGTGGCCCCAGATATTTGGACACCATGGCAACAGAGGGGGCGCCCACAGACACCATGGCAACAGAGGGGCCGCCCACAGACGTGGTCAAAGTGCTCCATCTCCTGGTGCTCTCCTTCTCCTGGGGCATGCAGCTCTGGGTCTCCTTCATAGCAGGCTTTGCGTTGGTGCGGCAGGTGAGTCGGCACACCTTCGGCCTGGTGCAGAGTAAGCTCTTCCCGGTGTACTTCCACTGCCTGCTGGCGAGCAGCGCGGTCAGCCTGGCTGTGTTCGCGGCGTACCAACCAACGCTGCTGCTGGACTGGCATCAGAGTCTGCAGATGGGTCTGTTCTTTGTGTTACAGATGGTCTGTTCTTCATGTTGCAGATGGTCTGTTCTTTGTGTTACAGATGGTCTGTTCTTCATGTTACAGATGGTCTGTTCTTCATGTTATAGATGGTCTGTTCTTCATGTTATAGATGGTCTGTTCTTCATGTTACAGATGGTCTGTTCTTCATGTTACAGATGGTCTGTTCTTCATGTTATAGATGGTCTGTTCTTCATGTTATAGATGGTCTGTTCTTCATGTTATAGATGGTCTGTTCTTCATGTTATAGATGGTCTGTTCTTCATGTTACAGATGGGTCTGTTCTTCATGTTACAGATGGTCTGTTCTTGGTGTTAC

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU203412 lncRNA upstream 5038 410030 ~ 533915 (+) True G150318
TU203500 lncRNA upstream 33811 500054 ~ 505142 (+) True G150371
TU203400 lncRNA upstream 46150 471931 ~ 492803 (+) True G150306
TU203492 lncRNA upstream 59604 478492 ~ 479349 (+) False G150364
TU203493 lncRNA upstream 59604 478492 ~ 479349 (+) True G150364
TU203415 lncRNA downstream 72126 615328 ~ 615699 (+) True G150321
TU203414 lncRNA downstream 72573 615775 ~ 651572 (+) True G150320
TU203402 lncRNA downstream 76065 619267 ~ 658724 (+) True LOC120574137
TU203413 lncRNA downstream 107913 651115 ~ 652069 (+) True G150319
TU203505 lncRNA downstream 127403 670605 ~ 712473 (+) False epor
XM_039824252.1 mRNA upstream 12237 493970 ~ 526716 (+) True cnn1b
XM_039824251.1 mRNA upstream 88881 414793 ~ 450072 (+) True tlcd4b
XM_039824561.1 mRNA upstream 420508 69390 ~ 118445 (+) True plppr2a
XM_039824306.1 mRNA downstream 14503 557705 ~ 651022 (+) True rab3db
XM_039824277.1 mRNA downstream 112405 655607 ~ 656764 (+) False LOC120574137
XM_039824304.1 mRNA downstream 112405 655607 ~ 656764 (+) False LOC120574137
XM_039824296.1 mRNA downstream 112405 655607 ~ 656764 (+) False LOC120574137
XM_039824268.1 mRNA downstream 112405 655607 ~ 656764 (+) False LOC120574137
TU203455 other upstream 308042 228962 ~ 230911 (+) False G150336
TU203459 other upstream 308042 228962 ~ 230911 (+) False G150336
TU203422 other upstream 337522 159075 ~ 201431 (+) False G150326
TU203420 other upstream 337522 159219 ~ 201431 (+) True G150326
TU203421 other upstream 337522 159507 ~ 201431 (+) False G150326
XR_005641829.1 other downstream 112405 655607 ~ 656764 (+) False LOC120574137
XR_005641827.1 other downstream 112405 655607 ~ 656764 (+) False LOC120574137
XR_005641828.1 other downstream 112405 655607 ~ 656764 (+) False LOC120574137
XR_005641826.1 other downstream 112405 655607 ~ 656764 (+) False LOC120574137
XR_005641825.1 other downstream 112405 655607 ~ 656764 (+) False LOC120574137

Expression Profile