RNA id: unassigned_transcript_734


Basic Information

Item Value
RNA id unassigned_transcript_734
length 365
RNA type V_gene_segment
GC content 0.45
exon number 3
gene id LOC120574341
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9171332 ~ 9171913 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ttaacatgatggactataggacaggactgctgcttttaactctctgctgggcaggtgttgatggtcagactctgacagaatctgaaccagtggttaaaagacctggagaatcccacagattgacctgtTCAGCCTCTGGGTTTAACTTTGGTAGATCTTGGATGGCCTGGgtcagacaggctcctggaaaaggactggaatGGGTAGCAACTATTGAATATGATAGTGACAGCATCTACTACTCTCAGTCAGTTCAGGGCCGGTTTACGCtctccagagacaacagcagagagcagctgtatctgcagatgaacagtctgaagactgaagattctgctgtttattattgtcttttgttgttttga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU207634 lncRNA upstream 31535 9139466 ~ 9139797 (+) True G153261
TU207625 lncRNA upstream 50574 9120458 ~ 9120758 (+) True G153254
TU207597 lncRNA upstream 125171 9043517 ~ 9046161 (+) True G153239
TU207379 lncRNA upstream 129460 9039691 ~ 9041872 (+) False asphd1
TU207366 lncRNA upstream 157085 9011238 ~ 9014247 (+) True G153088
TU207671 lncRNA downstream 16525 9188438 ~ 9242716 (+) True G153291
TU207690 lncRNA downstream 145443 9317356 ~ 9400297 (+) True G153306
TU207684 lncRNA downstream 170732 9342645 ~ 9439312 (+) False G153301
TU207685 lncRNA downstream 219660 9391573 ~ 9439312 (+) True G153301
TU207713 lncRNA downstream 257862 9429775 ~ 9454183 (+) True G153322
XM_039825618.1 mRNA upstream 129287 9036901 ~ 9042045 (+) True asphd1
XM_039823792.1 mRNA upstream 202287 8959248 ~ 8969045 (+) False eps8l1a
XM_039824667.1 mRNA downstream 707389 9879302 ~ 9887967 (+) True LOC120574409
XM_039824673.1 mRNA downstream 767050 9938963 ~ 9939633 (+) True LOC120574415
XM_039824991.1 mRNA downstream 768610 9940523 ~ 10027725 (+) False LOC120574577
XM_039824992.1 mRNA downstream 768976 9940889 ~ 10027725 (+) False LOC120574577
XM_039824993.1 mRNA downstream 820876 9992789 ~ 10027725 (+) False LOC120574577
unassigned_transcript_733 other upstream 14512 9153736 ~ 9156820 (+) True LOC120574340
unassigned_transcript_732 other upstream 22608 9148184 ~ 9148724 (+) True LOC120574643
unassigned_transcript_731 other upstream 27912 9142990 ~ 9143420 (+) True LOC120574618
unassigned_transcript_730 other upstream 30340 9140322 ~ 9140992 (+) True LOC120574339
unassigned_transcript_729 other upstream 34954 9135816 ~ 9136378 (+) True LOC120574337
unassigned_transcript_735 other downstream 504 9172417 ~ 9173311 (+) False LOC120574342
unassigned_transcript_736 other downstream 12566 9184479 ~ 9185326 (+) True LOC120574631
unassigned_transcript_822 other downstream 578705 9750618 ~ 9751056 (+) True LOC120574616
unassigned_transcript_823 other downstream 580026 9751939 ~ 9752601 (+) True LOC120574628
TU207814 other downstream 580135 9752048 ~ 9752558 (+) False LOC120574628