RNA id: TU229750



Basic Information


Item Value
RNA id TU229750
length 245
lncRNA type intronic
GC content 0.49
exon number 2
gene id G169402
representative True

Chromosome Information


Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 28330652 ~ 28330971 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtgtgtctctgtgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtgtgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtgtgtttgtctgtgtgtgtgtgtttgtctgtgtgtgtgtgtgtctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU229747 lncRNA downstream 95703 28234590 ~ 28234949 (-) True G169399
TU229726 lncRNA downstream 126899 28163135 ~ 28203753 (-) True G169387
TU229716 lncRNA downstream 276643 28047607 ~ 28054009 (-) False LOC120544668
TU229620 lncRNA downstream 397790 27932292 ~ 27932862 (-) False LOC120544024
TU229565 lncRNA downstream 535864 27790056 ~ 27794788 (-) True G169289
TU229767 lncRNA upstream 26040 28357011 ~ 28357377 (-) True G169417
TU229804 lncRNA upstream 66009 28396980 ~ 28399180 (-) True G169447
TU229900 lncRNA upstream 368850 28699821 ~ 28704621 (-) True G169524
TU229929 lncRNA upstream 422304 28753275 ~ 28755551 (-) True G169550
TU229931 lncRNA upstream 426572 28757543 ~ 28761645 (-) True G169551
XM_039826551.1 mRNA downstream 17519 28219395 ~ 28313133 (-) False srrm3
XM_039826550.1 mRNA downstream 50951 28218961 ~ 28279701 (-) False srrm3
XM_039776633.1 mRNA downstream 66240 28219395 ~ 28264412 (-) False srrm3
XM_039826546.1 mRNA downstream 118533 28207663 ~ 28212119 (-) True hspb1
XM_039778593.1 mRNA downstream 208034 28051590 ~ 28122618 (-) False LOC120544668
XM_039777648.1 mRNA upstream 17645 28348616 ~ 28356555 (-) True LOC120544092
XM_039777646.1 mRNA upstream 27806 28358777 ~ 28367461 (-) True dhx33
XM_039777647.1 mRNA upstream 27806 28358777 ~ 28367167 (-) False dhx33
XM_039778141.1 mRNA upstream 68396 28399367 ~ 28470511 (-) False camkk1a
XM_039778140.1 mRNA upstream 68396 28399367 ~ 28470511 (-) True camkk1a
TU229743 other downstream 107402 28217243 ~ 28223250 (-) True srrm3
XR_005636427.1 other downstream 302875 27930539 ~ 28027777 (-) False LOC120544024
XR_005636444.1 other downstream 600504 27719805 ~ 27730148 (-) False gusb
TU229438 other downstream 811668 27515892 ~ 27518984 (-) False emc6
TU229110 other downstream 1638422 26688879 ~ 26692230 (-) False gng3
TU229887 other upstream 324186 28655157 ~ 28664051 (-) False ube2g1a
TU229954 other upstream 473414 28804385 ~ 28808430 (-) False atp5l
TU230221 other upstream 1431478 29762449 ~ 29796427 (-) True LOC120544028
XR_005636389.1 other upstream 1551835 29882806 ~ 29901937 (-) False LOC120543707
TU230376 other upstream 1614697 29945668 ~ 29948932 (-) False map6a

Expression Profile