RNA id: TU249564



Basic Information


Item Value
RNA id TU249564
length 377
lncRNA type inter_gene
GC content 0.62
exon number 1
gene id G184291
representative True

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 14416872 ~ 14417248 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ACGCACTCACAGATAACCTACCGCAATAAAGACCTCCCTCTCCGTGGGCATTCCAACAGGCCGCCAGCCGTTGGTGGCACGTCTGCGGCTGACTCTCTTTTGTTTGGTGCTGCTGAGGCTTGGCAAGGGCGACGGCTGTTTCTGGGGCAGCCGTGTGCGGCCCATTGACAGCAAGCCGTTGGAGGGTTCGTTGCTCTGTGGGCATTCCGTGGCCAGCTTTAGCCGGGCCTGGGGTTGGTCTCGCCCCGACAGGGGGGTCAGCAGATGGGGTTTAGTCTGGGTGGAAGTGGGCACGCTGGAGAGAGGGCAGCTGGAGATGGGCAGGGATGGGGGAACCAGAAGGGAGGGGCTGTGGTCACCCTGAGAGGAGGAGTAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU249563 lncRNA downstream 701 14414256 ~ 14416171 (-) True G184290
TU249562 lncRNA downstream 7615 14408988 ~ 14409257 (-) True G184289
TU249559 lncRNA downstream 22761 14393447 ~ 14394111 (-) True G184286
TU249475 lncRNA downstream 87936 14249214 ~ 14328936 (-) True G184224
XR_005636876.1 lncRNA downstream 173597 14238426 ~ 14243275 (-) True LOC120546499
TU249565 lncRNA upstream 5905 14423153 ~ 14424847 (-) True G184292
TU249567 lncRNA upstream 10556 14427804 ~ 14432172 (-) True G184293
TU249570 lncRNA upstream 14983 14432231 ~ 14438955 (-) False G184295
TU249571 lncRNA upstream 14983 14432231 ~ 14438955 (-) True G184295
TU249589 lncRNA upstream 73851 14491099 ~ 14493568 (-) True G184306
XM_039781332.1 mRNA downstream 28429 14387520 ~ 14388443 (-) True LOC120546407
XM_039781331.1 mRNA downstream 35695 14380014 ~ 14381177 (-) True LOC120546406
XM_039782071.1 mRNA downstream 38317 14360513 ~ 14378555 (-) False magl
XM_039782070.1 mRNA downstream 38317 14360513 ~ 14378555 (-) True magl
XM_039782356.1 mRNA downstream 57482 14335639 ~ 14359390 (-) True LOC120547016
XM_039782567.1 mRNA upstream 92200 14509448 ~ 14524171 (-) True lrfn5b
XM_039782477.1 mRNA upstream 107987 14525235 ~ 14529353 (-) True LOC120547074
XM_039781696.1 mRNA upstream 130790 14548038 ~ 14560460 (-) False znf410
XM_039781695.1 mRNA upstream 130790 14548038 ~ 14560460 (-) True znf410
XM_039782750.1 mRNA upstream 144159 14561407 ~ 14566531 (-) True cipcb
TU249319 other downstream 925744 13481924 ~ 13491128 (-) False mfsd2b
TU249306 other downstream 948807 13458616 ~ 13468065 (-) True fkbp1b
TU249194 other downstream 1201048 13206307 ~ 13215824 (-) False hmgn3
TU249578 other upstream 54953 14472201 ~ 14498370 (-) True G184299
TU249614 other upstream 154507 14571755 ~ 14579169 (-) False naa30
TU250064 other upstream 1371666 15788914 ~ 15791558 (-) False si:dkey-177p2.18
XR_005636881.1 other upstream 2073402 16490650 ~ 16517872 (-) False snap91b
XR_005637006.1 other upstream 2412548 16829796 ~ 16835983 (-) False gpatch2

Expression Profile