RNA id: TU251632



Basic Information


Item Value
RNA id TU251632
length 211
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G185795
representative True

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 19711527 ~ 19711832 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gctttatttccccgattgtttgtttaaataactcaacacacatacccattataagattaactggaacctgcgggctgcggtaaaagattgtgggcgtaacaagctcgctgacactgcggtcagggcggcgatgtagcaacccaggcagcaccaacaccggcactaaactccgacacacagtcggagaaaattggaataacagagatctgcg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU251631 lncRNA upstream 2015 19709214 ~ 19709512 (+) True G185794
TU251630 lncRNA upstream 2597 19708331 ~ 19708930 (+) True G185793
TU251528 lncRNA upstream 18471 19692136 ~ 19693056 (+) True G185716
TU251523 lncRNA upstream 58952 19652237 ~ 19652575 (+) True G185711
TU251496 lncRNA upstream 90744 19572600 ~ 19620783 (+) False zgc:193593
TU251636 lncRNA downstream 23686 19735518 ~ 19735724 (+) True G185799
TU251637 lncRNA downstream 24008 19735840 ~ 19736056 (+) True G185800
TU251639 lncRNA downstream 26162 19737994 ~ 19738264 (+) True G185802
TU251641 lncRNA downstream 27208 19739040 ~ 19739290 (+) True G185804
TU251673 lncRNA downstream 138342 19850174 ~ 19851711 (+) True G185827
XM_039781342.1 mRNA upstream 8136 19699722 ~ 19703391 (+) True LOC120546417
XM_039782314.1 mRNA upstream 63397 19634244 ~ 19648130 (+) False acp1
XM_039781214.1 mRNA downstream 832 19712664 ~ 19731224 (+) True si:dkey-119f1.1
XM_039781219.1 mRNA downstream 33345 19745177 ~ 19830843 (+) True fig4a
XM_039781220.1 mRNA downstream 33345 19745177 ~ 19801977 (+) False fig4a
XM_039781136.1 mRNA downstream 122653 19834485 ~ 19837398 (+) True LOC120546286
XM_039782594.1 mRNA downstream 140811 19852643 ~ 19860217 (+) True kif25
TU251521 other upstream 63371 19634283 ~ 19648156 (+) False acp1
XR_005636888.1 other upstream 172219 19429595 ~ 19539308 (+) False nhsl1b
XR_005636889.1 other upstream 172319 19429595 ~ 19539208 (+) False nhsl1b
XR_005636890.1 other upstream 172319 19429596 ~ 19539208 (+) False nhsl1b
TU251420 other upstream 503431 19204154 ~ 19208096 (+) False LOC120546624
TU251678 other downstream 144903 19856735 ~ 19860205 (+) False kif25
TU252459 other downstream 2232911 21944743 ~ 21947000 (+) True erh
TU252499 other downstream 2273947 21985779 ~ 22065589 (+) True G186394
XR_005636956.1 other downstream 3866546 23578378 ~ 23589689 (+) True nfkbie
XR_005636955.1 other downstream 3866546 23578378 ~ 23588514 (+) False nfkbie

Expression Profile