RNA id: TU259732


Basic Information

Item Value
RNA id TU259732
length 232
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G191292
representative False

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 2388594 ~ 2421229 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtatgtgtgtgtgtgtatgtgtgtgtgtgtgtatgtgtgtgtatgtgtgtgtgtgtgtgtgtgtatgtgtgtgtatgtgtgtgtatgtgtgtgtatgtgtgtgtatgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU259728 lncRNA upstream 730 2387590 ~ 2387864 (+) True G191290
TU259704 lncRNA upstream 12805 2355844 ~ 2375789 (+) True G191273
TU259703 lncRNA upstream 15255 2372878 ~ 2373339 (+) True G191272
TU259695 lncRNA upstream 67737 2319193 ~ 2320857 (+) False G191270
TU259701 lncRNA upstream 68609 2275594 ~ 2319985 (+) False G191270
TU259746 lncRNA downstream 650 2421879 ~ 2435635 (+) True G191306
TU259749 lncRNA downstream 1624 2422853 ~ 2425022 (+) True G191307
TU259747 lncRNA downstream 1883 2423112 ~ 2425022 (+) False G191307
TU259748 lncRNA downstream 1883 2423112 ~ 2425022 (+) False G191307
TU259753 lncRNA downstream 15833 2437062 ~ 2495205 (+) True G191309
XM_039784136.1 mRNA upstream 188137 2193300 ~ 2200457 (+) True LOC120548117
XM_039783719.1 mRNA upstream 276723 2006144 ~ 2111871 (+) False LOC120547899
XM_039784446.1 mRNA downstream 83538 2504767 ~ 2508381 (+) True rps27a
XM_039784693.1 mRNA downstream 107951 2529180 ~ 2637276 (+) True LOC120548433
XM_039784452.1 mRNA downstream 236628 2657857 ~ 2663678 (+) True LOC120548306
XM_039784458.1 mRNA downstream 407830 2829059 ~ 2829748 (+) True LOC120548310
XM_039784697.1 mRNA downstream 672738 3093967 ~ 3110958 (+) True LOC120548437
TU259649 other upstream 72359 2268828 ~ 2316235 (+) True LOC120548303
unassigned_transcript_1105 other upstream 267129 2121392 ~ 2121465 (+) True trnat-agu_15
unassigned_transcript_1104 other upstream 269774 2118747 ~ 2118820 (+) True trnat-agu_14
TU259632 other upstream 283897 2047957 ~ 2104697 (+) True G191236
TU260161 other downstream 334925 2756154 ~ 2761679 (+) True G191565
TU260163 other downstream 340821 2762050 ~ 2766062 (+) True G191567
TU260196 other downstream 354079 2775308 ~ 2778367 (+) True G191573
TU260181 other downstream 402135 2823364 ~ 2921724 (+) False G191571
TU260292 other downstream 672755 3093984 ~ 3095422 (+) False LOC120548437

Expression Profile