RNA id: TU260182


Basic Information

Item Value
RNA id TU260182
length 304
lncRNA type inter_gene
GC content 0.50
exon number 3
gene id G191571
representative False

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 2770633 ~ 3018448 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtctgtgtgtgtctctgtgtgtgtctgtctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtctctgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtgtgtgtc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU260206 lncRNA upstream 25352 2835634 ~ 2895066 (+) True G191582
TU260205 lncRNA upstream 26213 2825671 ~ 2894205 (+) True G191581
TU260173 lncRNA upstream 36295 2823567 ~ 2884123 (+) False G191571
TU260212 lncRNA upstream 37066 2882983 ~ 2883352 (+) True G191588
TU260207 lncRNA upstream 77407 2842192 ~ 2843011 (+) True G191583
TU260178 lncRNA downstream 28435 2950159 ~ 3000635 (+) False G191571
TU260185 lncRNA downstream 28435 2950159 ~ 3000635 (+) False G191571
TU260190 lncRNA downstream 28435 2950159 ~ 3000635 (+) False G191571
TU260218 lncRNA downstream 30506 2952230 ~ 2952618 (+) True G191594
TU260221 lncRNA downstream 43206 2964930 ~ 2965680 (+) False G191595
XM_039784458.1 mRNA upstream 90670 2829059 ~ 2829748 (+) True LOC120548310
XM_039784452.1 mRNA upstream 256740 2657857 ~ 2663678 (+) True LOC120548306
XM_039784693.1 mRNA upstream 283142 2529180 ~ 2637276 (+) True LOC120548433
XM_039784446.1 mRNA upstream 412037 2504767 ~ 2508381 (+) True rps27a
XM_039784136.1 mRNA upstream 719961 2193300 ~ 2200457 (+) True LOC120548117
XM_039784697.1 mRNA downstream 172243 3093967 ~ 3110958 (+) True LOC120548437
XM_039783787.1 mRNA downstream 202043 3123767 ~ 3137751 (+) True znf365
XM_039783786.1 mRNA downstream 202043 3123767 ~ 3137751 (+) False znf365
XM_039783788.1 mRNA downstream 202043 3123767 ~ 3137751 (+) False znf365
XM_039784298.1 mRNA downstream 251881 3173605 ~ 3176172 (+) True adob
TU260196 other upstream 142051 2775308 ~ 2778367 (+) True G191573
TU260163 other upstream 154356 2762050 ~ 2766062 (+) True G191567
TU260161 other upstream 158739 2756154 ~ 2761679 (+) True G191565
TU259649 other upstream 604183 2268828 ~ 2316235 (+) True LOC120548303
unassigned_transcript_1105 other upstream 798953 2121392 ~ 2121465 (+) True trnat-agu_15
TU260292 other downstream 172260 3093984 ~ 3095422 (+) False LOC120548437
unassigned_transcript_1108 other downstream 228090 3149814 ~ 3149886 (+) True trnar-acg_20
unassigned_transcript_1109 other downstream 228749 3150473 ~ 3150544 (+) True trnah-gug_17
TU260665 other downstream 1350249 4271973 ~ 4282720 (+) False arfgef3
TU260668 other downstream 1366173 4287897 ~ 4288644 (+) True G191903

Expression Profile