RNA id: TU276123



Basic Information


Item Value
RNA id TU276123
length 1087
RNA type TUCP
GC content 0.49
exon number 2
gene id G203836
representative True

Chromosome Information


Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 18182055 ~ 18184574 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GtcaacagtaggcctatatattgtaCAAATTGTACTTTTATCACACTTTTCAGCTTGGGTTACAAAAGCAAATATGAGAATGAAGCATGCAAAAGCATGATATCCAGCACAAAAGCTTGTGTACCTACCAGCTCAAGGAAGGTATTCTCCAGTGACTTATACTCTGGGGAGCTCTTGTTGAACAGGTCATCAGAAAACATCATGTTAGTGACCCTCAAGCTAAAGAAAACCACTAACTCTTTGCCCTTATCCACTGCGGTCATCAGAGGGGTGCTGGCTTGTCTCATGGTCGGTGCAGCCGTGGATTCGTACGGGCCTTCGTCAGACTCTGAGGGGAATCCACTACCGCTCTCTTCTTCCAGAGGTTCGTTCACATCCGCCTCGGTCCCATTCTGACTTGACCCTCCATCCTCTTGAATGTTTGAGTTCTCAGGAGGCAGGTCTGTTGAGACCGAGGTCGCTCCACTGTGCCCTCCACTAGAATCATCTCTGTCCTCAGGGGCTTCGCTGCTCTCTGCAGGGGATGCCAAAGACTCCACGTCTTTTTCTGGTTCAATGCCTTGGATGACATCCTCATGAGGTGATGGTGTAGCGACTGTGACTGTTGCTTCTATGACAGATGTCTCTGTGACCTCTGTAGACTCTGGCAGGTCCAGGTTAACCTCCACAGGTGTATCAGTATTTACTTCTTCTGGTTGGGAGTCTGGAGTTGCTAAGGGAAGGTCCTCATTCTGTTGCTCTGGGTGTTCCTCTGTGACCCCACCAGCTGGTTCAGGttCTCCGTCATCAGGCTCAGTTGGTGGTATCTCCTCCACCTCTGGCTCTGCTTCCTCTCCTTGCTCTGTGATAGTTTCCAGATGTGTGCCTGATGTTATAATGTCACCGTGCTCCTCAGCAGAATCTACTGTGGATTCCTCCTCTGCTGATGACGTTAACGGAGTCTCATCGATGACGGCAGGAGTGCTTTCTGGGAAGATGGTTGGGATGAAAGGCACAACGGTGTGTGTTTCTGGTTTGATTGCAGAAGCTTCCAAAGAGTTTTCTATCACTGCCACAGTAGGGAGGAAAGTATTGTCCGCTGTCGGCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU276100 lncRNA downstream 17480 18164352 ~ 18164575 (-) True G203828
TU276084 lncRNA downstream 56716 18123139 ~ 18125339 (-) False LOC120549177
TU276044 lncRNA downstream 103039 18078877 ~ 18079016 (-) False znf292a
TU275992 lncRNA downstream 195963 17977781 ~ 17986092 (-) True G203749
TU275930 lncRNA downstream 293579 17887505 ~ 17888476 (-) True G203705
TU276126 lncRNA upstream 5619 18190193 ~ 18191322 (-) True G203839
TU276138 lncRNA upstream 87642 18272216 ~ 18272423 (-) True G203851
TU276157 lncRNA upstream 423909 18608483 ~ 18608699 (-) True G203868
TU276158 lncRNA upstream 424184 18608758 ~ 18609089 (-) True G203869
TU276163 lncRNA upstream 479696 18664270 ~ 18664576 (-) True G203874
XM_039785873.1 mRNA downstream 51647 18124524 ~ 18130408 (-) True LOC120549177
XM_039786162.1 mRNA downstream 89152 18084728 ~ 18092903 (-) False cga
XM_039786163.1 mRNA downstream 89425 18084728 ~ 18092630 (-) False cga
XM_039786161.1 mRNA downstream 95851 18084728 ~ 18086204 (-) True cga
XM_039786156.1 mRNA downstream 98281 18071484 ~ 18083774 (-) True znf292a
XM_039785665.1 mRNA upstream 9522 18194096 ~ 18233326 (-) False myo6b
XM_039785664.1 mRNA upstream 9522 18194096 ~ 18233326 (-) True myo6b
XM_039785254.1 mRNA upstream 481651 18666225 ~ 18670694 (-) True cmpk2
XM_039785816.1 mRNA upstream 771468 18956042 ~ 19003463 (-) True kidins220a
XM_039785815.1 mRNA upstream 771468 18956042 ~ 18991929 (-) False kidins220a
TU276045 other downstream 98526 18081091 ~ 18083529 (-) False znf292a
XR_005637559.1 other downstream 318844 17863129 ~ 17863211 (-) True LOC120550081
XR_005637560.1 other downstream 319110 17862865 ~ 17862945 (-) True LOC120550082
XR_005637562.1 other downstream 319821 17862161 ~ 17862234 (-) True LOC120550085
TU275304 other downstream 2500132 15679363 ~ 15681923 (-) True G203208
TU277199 other upstream 2667522 20852096 ~ 20853084 (-) True G204685
TU277598 other upstream 3567843 21752417 ~ 21757577 (-) False LOC120549141
TU277654 other upstream 3746039 21930613 ~ 21931231 (-) False chrm5a
XR_005637366.1 other upstream 4593431 22778005 ~ 22783472 (-) False LOC120549283
TU278157 other upstream 4725533 22910107 ~ 22937857 (-) True G205380

Expression Profile