RNA id: TU44303



Basic Information


Item Value
RNA id TU44303
length 206
lncRNA type inter_gene
GC content 0.64
exon number 1
gene id G33369
representative True

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 41566215 ~ 41566420 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GGAGGCTGTGTGTACACCACTCGGCTGCAGTGAAGGAGGCGGTGGATGCGTAGGGAGGGGCGGCGAGCAAACGCCTTGCCGCAGTGCTCGCAGACGTACGGTTTCTCTCCGGTGTGCAGCACCATGTGCTCCTTCAGGTCCCGCTTCAGGCCGTACGTCTTCTCACAGTGAGGGCAGGGGAACGGACGCTCCCCACGGTGACTCAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU44302 lncRNA downstream 740 41560832 ~ 41565475 (-) True G33368
TU44277 lncRNA downstream 120473 41445529 ~ 41445742 (-) True G33347
TU44071 lncRNA downstream 629151 40936841 ~ 40937064 (-) True G33196
TU44033 lncRNA downstream 641161 40920334 ~ 40925054 (-) True G33168
TU44032 lncRNA downstream 647631 40918227 ~ 40918584 (-) True G33167
TU44305 lncRNA upstream 4582 41571002 ~ 41571236 (-) True G33371
TU44322 lncRNA upstream 103980 41670400 ~ 41672862 (-) True G33383
TU44365 lncRNA upstream 110557 41676977 ~ 41867839 (-) False G33416
TU44368 lncRNA upstream 110557 41676977 ~ 41768267 (-) True G33416
TU44391 lncRNA upstream 192025 41758445 ~ 41810063 (-) True G33431
XM_039794673.1 mRNA downstream 65808 41453032 ~ 41500407 (-) False ppip5k1a
XM_039795317.1 mRNA upstream 113853 41680273 ~ 41701675 (-) True cdhr5a
XM_039796159.1 mRNA upstream 191207 41757627 ~ 41764693 (-) False sirt3
XM_039794411.1 mRNA upstream 279839 41846259 ~ 41865162 (-) False LOC120555595
XM_039794409.1 mRNA upstream 279840 41846260 ~ 41865163 (-) True LOC120555595
XM_039795660.1 mRNA upstream 338349 41904769 ~ 41910826 (-) True LOC120556217
TU43972 other downstream 903594 40648676 ~ 40662621 (-) True G33122
TU42453 other downstream 6966674 34490660 ~ 34599541 (-) True G31955
TU42326 other downstream 7749845 33806936 ~ 33816370 (-) False LOC120555494
TU42327 other downstream 7749845 33806936 ~ 33816370 (-) False LOC120555494
XR_005638776.1 other downstream 8117154 33438463 ~ 33449061 (-) False znf710b
TU44387 other upstream 191371 41757791 ~ 41764896 (-) True sirt3
TU44774 other upstream 832871 42399291 ~ 42402136 (-) True G33711
TU44891 other upstream 1418803 42985223 ~ 42990770 (-) True G33796
TU44958 other upstream 1648214 43214634 ~ 43214987 (-) True G33847
TU45036 other upstream 1886292 43452712 ~ 43456847 (-) True G33914