RNA id: XM_039794315.1


Basic Information

Item Value
RNA id XM_039794315.1
length 1940
RNA type mRNA
GC content 0.47
exon number 13
gene id gnb5b
representative True

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 33731134 ~ 33744672 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTCACAGCTTAAACGCTTCACTAAGAAGCTTACTGTTCCCTCGCAGACAATCCCCTTCACTGGAAAACTCAATTTAATTCTCCAGAGACAAATAACCTGCTGTACAGAGAGGAAAAAACATTCTCTTGTGAGGGCGTGTTGGTGATCATCTGCAGCTATGTGTGACCAGACGTTCGTGGCGGCCACTTTTGGCCCCTGTGAGAGCTGTGGGCTTGCAAGTCCTCTTATGAACATCTACATTAAGACTGAGCCCATAAACTACTGCTCCTTCTGTGTGGAAGTGATGGCTTGTAAGGGGCTCCAAGGAGGGGAAACCGTGTCGAGTCTGAAGAGGGAGAGCGAGAGTCTGAGGAAGAAGCTGGAGGAGGAGCGGAAAAAACTCAGCGACATAGAGTTGAACCAAGTGGCTGAGAAGATTGAGGTGTTGGGTCCTCTCTCCATAAAGACCAGACGTGTACTGAAGGGTCATGGGAACAAGGTGCTGTGTATGGACTGGTGTAAAGACAAACGTCGTCTCGTCAGCTCTTCACAGGATGGCAAAGTGATTGTCTGGGATGCATTCACTCTTAATAAGGAACATGGGATAGCCCTGCCGTGTACATGGGTCATGGCGTGTGCTTATGCTCCCTCAGGTTGTGCTGTGGCATGTGGCGGATTGGATAACAAGTGCTCAGTGTTCCCGCTGTCACTGGACAAAAATGAGAACTTGTCTGCAAAGAAGAAGTCTGTTGCCATGCACACAAACTATGTATCAGGATGCACCTTCACCAGCTCTGACATGCAGATCCTGACCTCCAGCGGTGATGGCACATGTGCCTTGTGGGATGTGGAGAGCGGGCAGCTGCTGCAGAGTTTTCATGGTCACACAGCTGATGTCTTGTCCCTGGACCTCGCCCCATCTGAGACTGGAAACACTTTTGTCTCTGGGGGCTGTGATAAGAAGGCCAACATATGGGACATGCGCTCTGGACAGAACATTCAGTCTTTTGAGAGCCACGAGTCCGACATCAACTGTGTAAAGTACTACCCCAGTGGAGATGCATTTGCGTCTGCTTCAGACGATGCCACATGCCGTTTCTATGATCTGCGAGCTGACCGTGAGGTAGCCGTCTACCAGAAGGACAGCGTCATATTTGGTGCTTCCACTGTGGACTTCTCTCTGAGTGGTCGCCTGCTTTTTGCTGGTTATAATGACTACACCATAAATGTGTGGGACGTTTTGAAGGGAACTCGTGCCTCCATCCTGTTTGGCCATGAGAACCGCGTCAGCAGAGTCAGAGTGTCACCTGACGGCACAGCGCTCTGCTCGGCCTCCTGGGACAACACCTTACGGATTTGGTCCTAGAGCTGATATCACAGTTGTAATCCAGTGAGGACAGCGCCAGCACTGTGCCACTGCCAAGACTACCTGCCGGAAACCAACCCTACTGCAGGAGTGTGTACATCCAAACCTTCAgtgtaacaaacacacagaagcacCAAACCTAAAATATCTCTTCTGACTGAGAATATATCATTGTTTCATCAACTGTAGGCCGGATGTTCATTGAACAGAGACAGAAGTTAGGAGTTCTAATCTTAGTAGCTTCATGACTGATTGTATAATTAATTGTTATTGCTAATATAGTGGGAAATAATTTTAAGTGGCATGTGTCTGCTCTGCCATGTAGATCTACAGACAATATCAATGATTGTCTTGAAAATAATGTACATCGGTGTACCTTAGCCGTGGGAACCAAAGCTGTCCAGAATCATACTATAGGTGTACACACTGTAATCGTTGTTGTCACAGTGGCAGTCTGCCATACAGTAGATATTGTTGTGATTATCCAAAAGAAGACAACTTAATTGTGGCCACAGCTTTTTCGTAatttaatatacattaacctCAACGACTTAGATTAATTTATTGTGAGAAAATAAAGaagattttaaatatt

Function

GO: NA

KEGG:

id description
K04539 GNB5; guanine nucleotide-binding protein subunit beta-5

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU42296 lncRNA downstream 12554 33716719 ~ 33718580 (-) True G31822
TU42292 lncRNA downstream 15858 33714300 ~ 33715276 (-) True G31820
TU42221 lncRNA downstream 161755 33566426 ~ 33569379 (-) False serf2
TU42127 lncRNA downstream 395729 33333954 ~ 33335405 (-) True G31707
TU42126 lncRNA downstream 397196 33333098 ~ 33333938 (-) True G31706
TU42348 lncRNA upstream 111226 33855898 ~ 33856166 (-) True G31862
TU42371 lncRNA upstream 435233 34179905 ~ 34180494 (-) True G31881
TU42400 lncRNA upstream 541616 34286288 ~ 34287080 (-) True G31906
TU42401 lncRNA upstream 542538 34287210 ~ 34287785 (-) True G31907
TU42500 lncRNA upstream 1120205 34864877 ~ 34867518 (-) True G31994
XM_039796200.1 mRNA downstream 2877 33723861 ~ 33728257 (-) True bcl2l10
XM_039794005.1 mRNA downstream 95643 33630063 ~ 33635491 (-) True LOC120555331
XM_039794933.1 mRNA downstream 161759 33566371 ~ 33569375 (-) True serf2
XM_039795199.1 mRNA downstream 259799 33436811 ~ 33471335 (-) False znf710b
XM_039794321.1 mRNA upstream 471 33745143 ~ 33806294 (-) True myo5aa
XM_039794325.1 mRNA upstream 471 33745143 ~ 33799613 (-) False myo5aa
XM_039794319.1 mRNA upstream 471 33745143 ~ 33799612 (-) False myo5aa
XM_039794317.1 mRNA upstream 471 33745143 ~ 33799612 (-) False myo5aa
XM_039794318.1 mRNA upstream 471 33745143 ~ 33799612 (-) False myo5aa
XR_005638776.1 other downstream 282073 33438463 ~ 33449061 (-) False znf710b
TU42136 other downstream 383044 33342247 ~ 33348090 (-) True wdr76
TU41994 other downstream 836729 32891499 ~ 32894405 (-) True G31602
TU41279 other downstream 3199018 30530751 ~ 30532116 (-) False fam120b
XR_005638738.1 other downstream 4269898 29402754 ~ 29461236 (-) False elp4
TU42326 other upstream 62264 33806936 ~ 33816370 (-) False LOC120555494
TU42327 other upstream 62264 33806936 ~ 33816370 (-) False LOC120555494
TU42453 other upstream 745988 34490660 ~ 34599541 (-) True G31955
TU43972 other upstream 6904004 40648676 ~ 40662621 (-) True G33122
TU44387 other upstream 8013119 41757791 ~ 41764896 (-) True sirt3

Expression Profile