RNA id: TU81853



Basic Information


Item Value
RNA id TU81853
length 253
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G61067
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 12638608 ~ 12638860 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GGATGTTTGGTTGCATAAAGCTTCAGGTTCATGTTAagttattttcaaatgtaatttattaaaggggtgatagaatgcaaaactgattttaccttgtcatagttgaataatgacagtttagtgggtaactaggacataaatagaacctcaaaatcccattgacacctcttttctctgcaaatctcacaatttgaaactgcctctgaaaacgggcaaatctcaacaagccgcctagttgacgtcaactctgcgg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU81834 lncRNA upstream 29150 12609104 ~ 12609458 (+) True G61053
TU81833 lncRNA upstream 30551 12607644 ~ 12608057 (+) True G61052
TU81831 lncRNA upstream 34398 12603756 ~ 12604210 (+) True G61050
TU81651 lncRNA upstream 649875 11988167 ~ 11988733 (+) True G60901
TU81646 lncRNA upstream 717219 11921031 ~ 11921389 (+) True G60896
TU81877 lncRNA downstream 40849 12679709 ~ 12682068 (+) True G61091
TU81962 lncRNA downstream 360599 12999459 ~ 12999887 (+) True G61160
TU81973 lncRNA downstream 531933 13170793 ~ 13180491 (+) False LOC120560904
TU82004 lncRNA downstream 542722 13181582 ~ 13182257 (+) False G61192
TU82005 lncRNA downstream 542722 13181582 ~ 13182308 (+) True G61192
XM_039804008.1 mRNA upstream 137058 12474081 ~ 12501550 (+) True LOC120561040
XM_039804006.1 mRNA upstream 152842 12474173 ~ 12485766 (+) True LOC120561039
XM_039802658.1 mRNA upstream 479910 12121425 ~ 12158698 (+) True dpp7
XM_039804630.1 mRNA upstream 790468 11838184 ~ 11848140 (+) False LOC120561470
XM_039803770.1 mRNA downstream 102006 12740866 ~ 12748536 (+) True fgf17
XM_039803771.1 mRNA downstream 102006 12740866 ~ 12748536 (+) False fgf17
XM_039802808.1 mRNA downstream 113650 12752510 ~ 12794431 (+) False fkbp15b
XM_039802810.1 mRNA downstream 115839 12754699 ~ 12794431 (+) False fkbp15b
XM_039802807.1 mRNA downstream 115840 12754700 ~ 12794431 (+) False fkbp15b
TU81647 other upstream 712007 11926183 ~ 11926601 (+) True G60897
XR_005639564.1 other upstream 1886168 10748116 ~ 10752440 (+) True LOC120561144
XR_005639563.1 other upstream 1886168 10748116 ~ 10752440 (+) False LOC120561144
XR_005639565.1 other upstream 1886168 10748116 ~ 10752440 (+) False LOC120561144
XR_005639562.1 other upstream 1891660 10726446 ~ 10746948 (+) False LOC120561142
TU81938 other downstream 282287 12921147 ~ 12923836 (+) False G61139
TU81939 other downstream 282287 12921147 ~ 12923836 (+) True G61139
TU82171 other downstream 1468623 14107483 ~ 14109546 (+) True G61337
TU82172 other downstream 1502582 14141442 ~ 14142050 (+) True G61338
TU82219 other downstream 1644557 14283417 ~ 14283871 (+) True G61383

Expression Profile