Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU327521 |
| length | 835 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 3 |
| gene id | G276319 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 4361872 ~ 4588362 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579965.1 | lncRNA | upstream | 12653 | 4373251 ~ 4374449 (+) | True | LOC117599565 |
| TU327513 | lncRNA | upstream | 12659 | 4361872 ~ 4374443 (+) | False | G276319 |
| XR_004579966.1 | lncRNA | upstream | 23868 | 4362007 ~ 4363234 (+) | True | LOC117599566 |
| TU327484 | lncRNA | upstream | 57374 | 4316939 ~ 4329728 (+) | False | mdm2 |
| TU327440 | lncRNA | upstream | 115805 | 4270778 ~ 4271297 (+) | True | G276264 |
| TU327503 | lncRNA | downstream | 8379 | 4413551 ~ 4414929 (+) | False | G276319 |
| XR_004579963.1 | lncRNA | downstream | 8501 | 4413673 ~ 4414964 (+) | True | LOC117599563 |
| TU327515 | lncRNA | downstream | 24922 | 4430094 ~ 4441093 (+) | False | G276319 |
| TU327525 | lncRNA | downstream | 38144 | 4443316 ~ 4451312 (+) | True | LOC117599564 |
| XR_004579964.1 | lncRNA | downstream | 44583 | 4449755 ~ 4451044 (+) | False | LOC117599564 |
| XM_034313248.1 | mRNA | upstream | 57356 | 4315172 ~ 4329746 (+) | False | mdm2 |
| XM_034313247.1 | mRNA | upstream | 57356 | 4315293 ~ 4329746 (+) | False | mdm2 |
| XM_034313249.1 | mRNA | upstream | 57356 | 4316692 ~ 4329746 (+) | True | mdm2 |
| XM_034313017.1 | mRNA | upstream | 78037 | 4297802 ~ 4309065 (+) | False | slc35e3 |
| XM_034313368.1 | mRNA | downstream | 196855 | 4602027 ~ 4657215 (+) | True | LOC113525244 |
| XM_034313369.1 | mRNA | downstream | 196855 | 4602027 ~ 4657215 (+) | False | LOC113525244 |
| XM_034313205.1 | mRNA | downstream | 353651 | 4758823 ~ 4782822 (+) | True | slc26a5 |
| XM_034313013.1 | mRNA | downstream | 387709 | 4792881 ~ 4802717 (+) | True | prdm4 |
| XM_034313157.1 | mRNA | downstream | 401783 | 4806955 ~ 4818372 (+) | True | LOC117599542 |
| XR_004579955.1 | other | upstream | 131283 | 4124720 ~ 4255819 (+) | False | magi2a |
| TU327329 | other | upstream | 398442 | 3913634 ~ 3988660 (+) | False | ndufb2 |
| TU327325 | other | upstream | 471159 | 3913634 ~ 3915943 (+) | False | ndufb2 |
| TU328026 | other | downstream | 464352 | 4869524 ~ 4872741 (+) | False | LOC117599451 |
| TU328499 | other | downstream | 1023738 | 5428910 ~ 5443897 (+) | False | igf1 |
| TU328595 | other | downstream | 1389551 | 5794723 ~ 5805514 (+) | True | G277167 |
| TU328597 | other | downstream | 1389551 | 5794723 ~ 5816412 (+) | False | G277167 |
| TU328632 | other | downstream | 1561220 | 5966392 ~ 5989655 (+) | False | mest |
