Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403899.1 |
| length | 133 |
| RNA type | ncRNA |
| GC content | 0.43 |
| exon number | 1 |
| gene id | LOC113539022 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 16016352 ~ 16016484 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU197027 | lncRNA | downstream | 15840 | 16000219 ~ 16000512 (-) | True | G166390 |
| TU197013 | lncRNA | downstream | 82915 | 15933157 ~ 15933437 (-) | True | G166380 |
| TU196943 | lncRNA | downstream | 119782 | 15895667 ~ 15896570 (-) | True | G166319 |
| TU196899 | lncRNA | downstream | 170097 | 15664486 ~ 15846255 (-) | True | G166289 |
| TU196896 | lncRNA | downstream | 408830 | 15605903 ~ 15607522 (-) | True | G166286 |
| TU197138 | lncRNA | upstream | 250745 | 16267229 ~ 16267515 (-) | True | G166484 |
| TU197311 | lncRNA | upstream | 428357 | 16444841 ~ 16446005 (-) | True | G166633 |
| TU197551 | lncRNA | upstream | 728122 | 16744606 ~ 16744822 (-) | True | G166865 |
| TU197619 | lncRNA | upstream | 822597 | 16839081 ~ 16861229 (-) | False | LOC113538645 |
| XR_004578933.1 | lncRNA | upstream | 823950 | 16840434 ~ 16860820 (-) | False | LOC113538645 |
| XM_034308383.1 | mRNA | downstream | 8929 | 16001062 ~ 16007423 (-) | False | si:dkey-229e3.2 |
| XM_026934496.2 | mRNA | downstream | 8934 | 16001062 ~ 16007418 (-) | True | si:dkey-229e3.2 |
| XM_026934497.2 | mRNA | downstream | 23456 | 15987086 ~ 15992896 (-) | True | ahsa1b |
| XM_026933853.2 | mRNA | downstream | 34568 | 15917801 ~ 15981784 (-) | True | jmjd1ca |
| XM_034308030.1 | mRNA | downstream | 101642 | 15906357 ~ 15914710 (-) | True | egr2a |
| XM_034307848.1 | mRNA | upstream | 103233 | 16119717 ~ 16136443 (-) | False | zgc:174356 |
| XM_026933756.2 | mRNA | upstream | 103233 | 16119717 ~ 16136242 (-) | True | zgc:174356 |
| XM_034307927.1 | mRNA | upstream | 135169 | 16151653 ~ 16155407 (-) | False | LOC117598246 |
| XM_034307926.1 | mRNA | upstream | 135169 | 16151653 ~ 16152947 (-) | True | LOC117598246 |
| XM_026933782.2 | mRNA | upstream | 253369 | 16269853 ~ 16278268 (-) | False | LOC113538604 |
| XR_003403876.2 | other | downstream | 253634 | 15720457 ~ 15762718 (-) | False | eml5 |
| XR_003403862.2 | other | downstream | 352857 | 15635086 ~ 15663495 (-) | False | ktn1 |
| XR_003403861.2 | other | downstream | 352857 | 15635086 ~ 15663495 (-) | False | ktn1 |
| TU196803 | other | downstream | 694348 | 15304623 ~ 15322004 (-) | False | pgfb |
| XR_004578922.1 | other | downstream | 898988 | 15109594 ~ 15117364 (-) | False | capn3a |
| XR_004578948.1 | other | upstream | 1229455 | 17245939 ~ 17247819 (-) | False | htr1b |
| XR_004578949.1 | other | upstream | 1229455 | 17245939 ~ 17247157 (-) | False | htr1b |
| TU198371 | other | upstream | 2289259 | 18305743 ~ 18316207 (-) | True | G167566 |
| TU198372 | other | upstream | 2289259 | 18305743 ~ 18316207 (-) | False | G167566 |
| TU198375 | other | upstream | 2362413 | 18378897 ~ 18382455 (-) | False | gdf7 |
