Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC117598930 |
| length | 351 |
| RNA type | V_segment |
| GC content | 0.46 |
| exon number | 2 |
| gene id | LOC117598930 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 22246772 ~ 22247215 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU254864 | lncRNA | downstream | 5810 | 22236967 ~ 22240962 (-) | False | G215182 |
| TU254889 | lncRNA | downstream | 9261 | 22236967 ~ 22237511 (-) | False | G215182 |
| TU254995 | lncRNA | downstream | 49360 | 22164570 ~ 22197412 (-) | True | G215228 |
| TU254781 | lncRNA | downstream | 106632 | 22125672 ~ 22140140 (-) | True | G215172 |
| TU254985 | lncRNA | downstream | 110765 | 22080162 ~ 22136007 (-) | True | G215221 |
| TU254808 | lncRNA | upstream | 7211 | 22254426 ~ 22283330 (-) | False | G215182 |
| TU254830 | lncRNA | upstream | 13782 | 22260997 ~ 22283330 (-) | False | G215182 |
| TU255019 | lncRNA | upstream | 91827 | 22339042 ~ 22344517 (-) | False | LOC117598814 |
| TU255027 | lncRNA | upstream | 143141 | 22390356 ~ 22397751 (-) | True | G215249 |
| TU255043 | lncRNA | upstream | 198907 | 22446122 ~ 22543980 (-) | True | G215262 |
| XM_026936343.2 | mRNA | downstream | 632897 | 21586098 ~ 21613875 (-) | False | b4galt1l |
| XM_026936342.2 | mRNA | downstream | 632897 | 21586098 ~ 21613875 (-) | True | b4galt1l |
| XM_034309841.1 | mRNA | downstream | 866556 | 21368754 ~ 21380216 (-) | True | srp72 |
| XM_026916545.2 | mRNA | downstream | 879660 | 21360562 ~ 21367112 (-) | True | arl9 |
| XM_034309813.1 | mRNA | upstream | 79511 | 22326726 ~ 22345779 (-) | True | LOC117598814 |
| XM_034310140.1 | mRNA | upstream | 152470 | 22399685 ~ 22419910 (-) | False | LOC117598969 |
| XM_034309681.1 | mRNA | upstream | 305509 | 22552724 ~ 22582102 (-) | True | topaz1 |
| XM_026947027.2 | mRNA | upstream | 306414 | 22553629 ~ 22582102 (-) | False | topaz1 |
| XM_026947028.2 | mRNA | upstream | 306415 | 22553630 ~ 22582102 (-) | False | topaz1 |
| TU254875 | other | downstream | 2172 | 22231271 ~ 22244600 (-) | False | G215182 |
| LOC117598897 | other | downstream | 2186 | 22244064 ~ 22244586 (-) | True | LOC117598897 |
| TU254827 | other | downstream | 5810 | 22231271 ~ 22240962 (-) | False | G215182 |
| LOC117598902 | other | downstream | 5823 | 22240497 ~ 22240949 (-) | True | LOC117598902 |
| LOC117598907 | other | downstream | 14304 | 22231972 ~ 22232468 (-) | True | LOC117598907 |
| LOC117598908 | other | upstream | 2875 | 22250090 ~ 22250613 (-) | True | LOC117598908 |
| TU255003 | other | upstream | 3716 | 22250931 ~ 22272210 (-) | True | G215235 |
| TU254852 | other | upstream | 7211 | 22254426 ~ 22283330 (-) | False | G215182 |
| LOC117598967 | other | upstream | 7218 | 22254433 ~ 22254852 (-) | True | LOC117598967 |
| LOC117598923 | other | upstream | 13785 | 22261000 ~ 22261463 (-) | True | LOC117598923 |
